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TNF affects TNFRSF1A
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TNF binds TNFRSF1A.
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67 | 46 7
sparser
"In the present study, we showed that development of cardiac hypertrophy was closely associated with the up-regulation of myocardial TNFR1, ADAM-17 and TNF-α, indicating an important role of TNF–α signal system in cardiac hypertrophy."
sparser
"Using mice deficient in SP-A and MCs (SP-A −/− Kit W-sh/W-sh mice) engrafted with either TNF-α −/− or TNF receptor (TNF-R) −/− MCs, we found that augmented airway responses during M pneumoniae infection is a result of TNF-α interactions with MCs through the TNF-R and not MC-derived TNF-α."
sparser
"The Fas-Fas ligand interaction between macrophages and L929 cells increased the expression of Fas-associated death domain, and tumor necrosis factor-tumor necrosis factor receptor 1 interaction between macrophages and L929 cells increased the expression of tumor necrosis factor receptor-associated death domain in L929 cells."
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"VanArsdale and Ware 1994 have demonstrated the TNF-dependent association with TNFR1 of a serine protein kinase activity in U937 cells."
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sparser
"TNF-TNFR1 binding activates the nuclear factor kappa-light-chain-enhancer of activated B cells (NF-κB), c-Jun amino-terminal kinase (JNK), the mitogen-activated protein kinases (MAPKs), and p38 [ xref ]."
reach
"Binding of TNF to TNFR1 induces the independent recruitment of the adaptor protein TRADD and the kinase RIPK1 to the receptor 's DD via homotypic DD interactions."
sparser
"The molecular mechanism of cell cycle arrest and apoptosis induced by QdNOs were explored. xref report that MEQ inhibited cell proliferation by arresting cells at the G2/M phase of the cell cycle. xref demonstrated that OLA induced cell cycle arrest to the S phase and dose-dependent apoptotic cell death in HepG2 cells through a caspase-9 and -3 dependent mitochondrial pathway. xref found that QCT induced apoptosis in HepG2 cells via activation of caspase, interaction of TNF-α and TNFR1 and modulation of the protein levels of Bid, Bax, and Bcl-2, involving the participation of p53, p38, and JNK."
reach
"In the network identified by GeneGo, conditions in the extracellular environment are sensed inside the cell via binding of TNF to TNF-R1, activating TNF-R1 [XREF_BIBR, XREF_BIBR]."
sparser
"TNF-α binds to its receptor TNFR-I in VSMC and EC and results in ROS production in a time and dose-dependent manner."
reach
"TNF interacts with two receptors, TNF-R1 and -R2."
reach
"In chronic inflammatory conditions, e.g. in IBD, interaction between TNF-alpha and TNFR1 can lead to stimulation of nuclear factor kappaB (NF-kappaB) in immune cells, which promotes transcription of genes, leading to cellular proliferation."
reach
"It has also been proposed that p70 can facilitate the binding of TNF to p55 (Tartaglia and Goeddel, 1992a)."
reach
"TNFalpha binds to TNFR1."
sparser
"TNF binding to TNFR1 triggers apoptosis through two pathways, by activation of the adaptor proteins TNFR1-associated death domain (TRADD) and Fas-associated death domain (FADD)."
sparser
"Moreover, since TNF-α can bind to two receptor subtypes, TNFR1 (p55-R) and TNF receptor 2 (p75-R), we next wish to examine which receptor is involved in SAH-induced apoptosis."
reach
"In contrast, in cells exposed to both TNFalpha and AgNPs, the nanoparticles non specifically bind to TNFR1 and TNFalpha binds specifically with the same receptor, forming a TNFR1, TNFalpha, and AgNPs complex which then enters the cells by receptor mediated endocytosis."
sparser
"An exciting recent study of Gómez et al. [ xref ] showed that SpA interacts directly with TNFR1 and mimics TNF- α proinflammatory signaling by recruitment of the adaptor molecules the TNFR-associated death domain (TRADD), receptor-interacting protein (RIP), and TNFR-associated factor (TRAF) 2 to the receptor and the activation of the mitogen-activated protein kinases (MAPKs) p38 and c-Jun NH2-terminal kinases 1 and 2 (JNK1/2), which induces translocation and activation of transcriptional factor NF- κ B and mediates IL-8 gene expression."
sparser
"The difference in the signaling of the p60 form of the TNF receptor and Fas has been reported previously [17]."
sparser
"Upon stimulation of TNF-R1 with TNF-α, death domain-containing protein TRADD (TNF receptor-associated death domain) becomes associated with the receptor and then recruits another death domain protein via the death domain/death domain binding."
sparser
"Upon binding to TNFα, which is a trimer, TNFR1 also forms a trimer that recruits TNFR1-associated death domain protein (TRADD) and triggers the sequential formation of two distinct complexes: complex I and II, which activate NF-κB and apoptosis, respectively ( xref ) xref ."
sparser
"Upon binding to TNF, TNFR1 binds the adaptor protein TRADD which recruits caspase-8 via FADD leading to apoptosis [8] ."
sparser
"Thus, upon TNF binding, TRADD binds the DD of TNFR1 and, in turn recruits RIP1."
sparser
"A slightly higher concentration of LTa was re- quired to inhibit 125I-TNF binding to p60:Fc (Ki ~ 650 pM)."
sparser
"Unlabeled TNF at a concentration of ~ 150 pM inhibited 50% of the maximum 125I-TNF binding (Ki) to p60:Fc."
sparser
"In the present study, binding activity of TNF-alpha to TNF-R1 and protein levels of IkappaB-alpha and nuclear transcription factor kappa B (NF-kappaB) p65 subunit in HeLa cells were measured using enzyme-linked immunosorbent assay (ELISA) and western-blot analysis."
sparser
"To examine the association of A20 with the p55 TNF receptor complex and its effect on the recruitment of IKK1 to the receptor and to examine the effect of NEMO on IKK1 recruitment, HEK 293T cells were seeded on 10 cm plates (2 × 10 6 /plate)."
sparser
"The possible reasons might be that the increased binding of Mt rh471 TNFalpha mainly to TNFR-p55 results in induction of apoptosis of SP cells, while Wt rhTNFalpha could bind to both TNFR-p55 and TNFR-p75 which would lead to NFkappaB activity, resulting in a discounted apoptotic effect."
sparser
"Using surface plasmon resonance, we measured single-site binding affinities for the large receptor TNFR1 binding to its ligands TNFα (K D = 1.4 ± 0.4 nM) and lymphotoxin-α (K D = 50 ± 10 nM), and also for the small receptor Fn14 binding to TWEAK (K D = 70 ± 10 nM)."
sparser
"Tumor necrosis factor receptor 1 (TNFR1) is a membrane receptor able to bind TNF-alpha or TNF-beta."
sparser
"Tumor necrosis factor-alpha (TNF-α) binds to TNFR1 and TNFR2 and the TNFRs induce TNF-α production."
sparser
"TNF interacted with TYK2 and TNFRSF1A interacted with JAK2 , SOCS2 , SOCS1 , and STAT4."
sparser
"The antitumor activity of TNF-α is associated with death receptor-mediated programmed cell death, which is initiated by the binding of TNF-α to TNFR1 ( xref )."
sparser
"The denser fractions failed to show association of TNFR1 with caveolin-1 even after TNF treatment."
sparser
"Our study shows that high sCD30, TNFalpha, IL6 and TNF-RI levels are associated with advanced disease or a worse prognostic score."
sparser
"The binding of TNFR1-Ig and TNFR2-Ig to bovine TNF-α was analyzed by enzyme-linked immunosorbent assay (ELISA)."
sparser
"For those cytokines significantly associated with ALS, the ESs associated with the results of TNF-α, TNFR1 and VEGF were large, suggesting the potential usefulness of these cytokines as practical diagnostic biomarkers for ALS in the future."
sparser
"After the binding of TNF-α to TNFR1, the activated receptor may interact with RIP1 via the death domains (DD), which may recruit cellular inhibitor of apoptosis proteins (cIAPs) (such as cIAP1 and cIAP2) and subsequently form the plasma membrane associated complex, leading to the activation of nuclear factor κB and mitogen-activated protein kinases (MAPKs)."
sparser
"Pleural effusion as diagnosed by either chest X-ray or ultrasonography was associated with up-regulation of members of the NF-κB pathway such as TNFA and TNFR1 , but also with IL1RA , MIP1A and TLR1 and was inversely related to MIF and TLR7 ."
sparser
"RIPK1 rapidly associates with the TNF-activated TNFR1 signaling complex, and undergoes polyubiquitination with multiple linkages. xref , xref RIPK1 K63 polyubiquitination is critical for scaffolding the TAK/TAB kinase complex that phosphorylates IKKβ. xref Linear, methionine1-linked polyubiquitination of RIPK1 (effected by LUBAC) augments recruitment of IKKγ complexed to IKKα and IKKβ, which is then phosphorylated and thereby activated by transforming growth factor-β-activated kinase 1. xref Thus, deubiquitination of RIPK1 diminishes downstream NFκB activation."
sparser
"Among the pathways in which KEGG is top-ranked and associated with diseases such as diabetes and inflammatory complication, the target proteins involved in metabolic pathways were adenosine deaminase (ADA), adenosine kinase (ADK), pancreatic alpha-amylase (AMY2A), fatty acid synthase (FASN), fructose-1,6-bisphosphatase 1 (FBP1), folate hydrolase 1 (FOLH1), leukotriene A-4 hydrolase (LTA4H), prostaglandin G/H synthase 2 (PTGS2), and sorbitol dehydrogenase (SORD); the target proteins involved in cancer-related pathways included GSK3 beta, inhibitor of nuclear factor kappa-B kinase subunit beta (IKBKB), IL6, peroxisome proliferators-activated receptors (PPAR), PTGS2, transforming growth factor beta-1 (TGFB1), cellular tumor antigen p53 (TP53), and vascular endothelial growth factor A (VEGFA); target proteins involved in the PI3K-Akt signaling pathway consisted of GSK3 beta, IKBKB, IL6, IRS1, spleen tyrosine kinase (SYK), toll-like receptor (TLR4), TP53, and VEGFA; the NF-kappa B signaling pathway interacted with proteins such as IKBK beta, interleukin-1 receptor-associated kinase 4 (IRAK-4), PTGS2, SYK, TLR4, TNF, and TNFRSF1A; mitogen-activated protein kinase (MAPK), IKBK beta, transforming growth factor beta-1 (TGFB1), TNF, TNFRSF1A, and TP53 interacted with the target protein involved in the MAPK signaling pathway; IKBKB and IL6 are involved in the Toll-like receptor signaling pathway, IRAK4, TLR4, and TNF; and the target proteins involved in the TNF signaling pathway included IL6, PTGS2, TNF, and TNFRSF1A. Previous studies have identified target proteins that were active in the mulberry leaves and involved in specific pathways."
sparser
"Extracellular TNF-α binds and activates two main receptors, TNFR1 (p55) and TNFR2 (p75) that are responsible for mediating the intracellular cytokine activity."
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"Tumor necrosis factor binds to TNFR1 and TNR2."
sparser
"Interaction of TNF with TNFR2, but not TNFR1, is directly co-stimulatory to TCR-mediated T cell activation, as demonstrated by the effects of agonistic monoclonal antibodies to TNFR2 on human CD4 cells [ xref ]."
sparser
"Binding of TNF-α to its specific receptors TNFR1 and TNFR2, activation of different downstream mediators including NF-kB, c-jun N-terminal kinase (JNK), caspase cascade, phosphatidylinositide 3-kinase (PI3K)/Akt and reactive oxygen species (ROS) lead cells to inflammation and cell survival as well as cell death ( xref , xref )."
sparser
"Both TNFα (sTNF and tmTNF) can bind to both TNFR1 and TNFR2; sTNFα shows greater affinity for TNFR1 than TNFR2 causing inflammatory responses, leading to apoptosis, while tmTNFα acts mainly on TNFR2 leading to activation and cell survival."
sparser
"TNFα binds to two cognate receptors, TNFR1 and TNFR2 [ xref , xref ]."
sparser
"Although BCG induction of TNF can interact with both TNFR1 and TNFR2, it may induce TNF production at low levels, thereby possibly boosting the expansion of Tregs ( xref ), which can provide benefits for the treatment of autoimmune diseases."
sparser
"The soluble TNF-α can bind to TNFR1 and TNFR2 [28] , hence the expression pattern of both TNFR1 and TNFR2 in SH-SY5Y was analyzed in the presence/absence of TNF-α using real time PCR."
sparser
"The binding of TNFα and LTα to TNFR2 and TNFR1 have been well characterized structurally ( xref , xref )."
sparser
"We evaluated the inhibitory activity of compound 1 on the binding of TNFα to its receptors TNFRI and TNFRII using an ELISA assay."
sparser
"TNFα binds to two receptors, TNFR1 and TNFR2, which can form multimeric complexes upon ligand binding."
sparser
"TNF interacts with two plasma membrane receptors, TNF-R1 and TNF-R2."
sparser
"RIP3 can also execute cell death in a RIP1-independent manner following interaction of TNFα with TNFR1 via c-Jun N-terminal kinases (JNK) activation and ROS overproduction."
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sparser
"Then the cells were resuspended in essential medium at a concentration of 5 x lO'/ml and incubated for another 16 h at 37 C. Thereafter specific TNF binding to p60 and p80 was determined as described in section 2."
sparser
"Here we report that blockade of IL-1α/β and TNFα binding to IL-1R and TNFR1, respectively, reduced neuropathology in parietal cortex, hippocampus, and thalamus and improved outcome."
TNF-R32W binds TNFRSF1A. 1 / 1
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reach
"Indeed, mutated R32W and S86T TNFalpha binds to TNFR1, whereas mutated D143N and A145R exclusively binds to TNFR2, suggesting that different subdomains of TNFalpha modulate its specificity towards TNFR1 or TNFR2 [31,32]."
TNF-S86T binds TNFRSF1A. 1 / 1
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"Indeed, mutated R32W and S86T TNFalpha binds to TNFR1, whereas mutated D143N and A145R exclusively binds to TNFR2, suggesting that different subdomains of TNFalpha modulate its specificity towards TNFR1 or TNFR2 [31,32]."
TNF activates TNFRSF1A.
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10 |
bel
"Because RIP1 and TRAF2 are downstream effectors of the TNF receptor, it is possible that MNNG induces TNF through RIP1 and TRAF2 to trigger cell death. To investigate this possibility, we examined the sensitivity of TNFR1-/- MEF cells to MNNG treatment and found that it is comparable with that of WT MEF cells (Fig. 6c). As expected, TNFR1-/- MEF cells are resistant to TNF-induced cell death (Fig. 6c). These results exclude the possibility that RIP1 and TRAF2 function in the TNF signaling pathway in MNNG-treated cells."
bel
"The results support the following pathway, whereby TNF-alpha enhances expression of ICAM-1 in NHBE cells: TNF-alpha --> TNF-RI --> PC-PLC --> DAG --> PKC --> (NF-kappaB?) --> ICAM-1 mRNA --> ICAM-1 surface expression."
bel
"Consistent with the in vivo findings, p75 blockade resulted in significant reduction of TNF-induced VCAM-1 and E-selectin expression by 28 and 23%, respectively (P < 0.05), but had no significant effect on ICAM-1 (Fig. 4A). On the other hand, as with in vivo experiments, p55 blockade significantly decreased the expression of all adhesion molecules"
bel
"To determine the cytotoxic effects and the type of cell death facilitated by TNF in A549 cells, we treated cells with TNF and analyzed cell death based on morphological and biochemical assays. The death rate of A549 cells increased with increasing concentration of TNF (Fig. 1b), and cell death was characterized by cytoplasmic condensation and pyknotic nuclei without apoptotic body formation (Fig. 1c). Dose-dependent release of LDH into the culture medium was also noted (Fig. 1d); this is frequently encountered after necrotic cell death due to rupture of the cell membrane....Thus, TNF triggers necrotic rather than apoptotic cell death in A549 cells."
bel
"After being processed by such metalloproteinases as TNF-a-converting enzyme (TACE) between residues alanine76 and valine77, the soluble form of TNF-a of 157 amino acid residues (17 kDa) is released and mediates its biological activities through Type 1 and 2 TNF receptors (TNF-R1 also known as TNFRSF1A, CD120a and TNF-R2 also known as"
bel
"After being processed by such metalloproteinases as TNF-a-converting enzyme (TACE) between residues alanine76 and valine77, the soluble form of TNF-a of 157 amino acid residues (17 kDa) is released and mediates its biological activities through Type 1 and 2 TNF receptors (TNF-R1 also known as TNFRSF1A, CD120a and TNF-R2 also known as"
bel
"To investigate whether either or both TNF receptors control the expression of these cell adhesion molecules, HUVEC were stimulated from 0 to 10 h with human TNF-a binding to both receptor types, and with receptor type-specific agonists. The specific activation of TNF-R55 was achieved using three independent reagents: first the agonistic mAb htr-1, second the RaTNF-K55 agonistic antibodies, and third a recombinant mutant of human TNF-a, 32W/S86T-TNF-a (Trp32 Thr86 TNF), which binds exclusively to TNF-K55. TNF-R75 activation was achieved with RaTNF-R75 agonistic antibodies."
bel
"he binding of TNF to the cell surface receptor TNF-R1 causes the recruitment of the adapter protein TRADD to the cytoplasmic domain of the receptor. TRADD then serves to recruit additional signaling molecules, including FADD, TRAF2, and RIP1 (Chen and Goeddel 2002)."
bel
"TABLE 1. Cytokine/chemokines, their receptors, and functions."
bel
"he binding of TNF to the cell surface receptor TNF-R1 causes the recruitment of the adapter protein TRADD to the cytoplasmic domain of the receptor. TRADD then serves to recruit additional signaling molecules, including FADD, TRAF2, and RIP1 (Chen and Goeddel 2002)."
TNF bound to TNFRSF1A activates TNFRSF1A. 4 / 4
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bel
"Tumor necrosis factor (TNF) alpha induced FLAP mRNA expression, FLAP promoter activity, and C/EBP alpha, delta, and epsilon binding to the proximal and distal promoter consensus sites."
bel
"Overexpression of NCOA-1, NCOA-2, and NCOA-3 enhanced E2-mediated gene expression by 3.17 +/- 0.51-, 2.33 +/- 0.8-, and 3.65 +/- 0.65-fold, respectively, and enhanced cell survival by suppressing tumor necrosis factor alpha (TNF-alpha)-induced cell death Overexpression of NCOA-1 and NCOA-3 exerted potent survival effects in breast carcinoma cells."
bel
"IAP, inhibitor of apoptosis; SMAC, second mitochondria-derived activator of caspase. In the death receptor pathway, ligands such as tumour-necrosis factor (TNF), FAS ligand (also known as CD95L), or TNF-related apoptosis-inducing ligand (TRAIL, also known as APO2 ligand (APO2L) or TNF ligand superfamily member 10 (TNFSF10)) interact with their respective death receptors (TNF receptor 1 (TNFR1), FAS (also known as CD95) and death receptor 4 (DR4, also known as TRAIL receptor 1 (TRAILR1)) or DR5 (also known as TRAILR2), respectively). These interactions ultimately lead to the recruitment of the FAS-associated death domain (FADD) and the activation of the protease caspase 8. Caspase 8 cleaves and activates caspase 3 and other downstream caspases, which results in a proteolytic cascade that gives rise to the cell death phenotype characterized by DNA fragmentation, chromatin condensation, cell shrinkage and membrane blebbing."
bel
"In contrast, the expression of cyclin D and E and the phosphorylation of Rb protein were not affected by ectopic expression of the drs gene, suggesting that an Rb-independent downregulation of cyclin A is involved in the suppression of anchorage-independent growth by means of the drs gene."
TNF increases the amount of TNFRSF1A.
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Transcriptionally active TNF increases the amount of TNFRSF1A. 7 / 7
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IL1B affects IL1R1
5 1 34 | 32 5
IL1B binds IL1R1.
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1 17 | 28 5
sparser
"IL-1RI binds IL-1α, IL-1β and IL-1R antagonist (IL-1Ra)."
sparser
"Downstream of IL-1β activation, pharmacological inhibition of IL-1R with anakinra resulted in decreased TAA formation similar to IL-1β and IL-1R knockout mice."
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sparser
"A model of IL-1RAcP was calculated on the basis of alignment of primary sequence and secondary structure with IL-1R, and then modeled on the crystal structure of IL-1R bound to IL-1β ."
sparser
"Binding of IL-1β to the IL-1R1 induces formation of a signaling complex with the IL-1 receptor accessory protein, which are both members of the Toll-like receptor family of proteins [ xref , xref ]."
reach
"Previous studies reported that IL1beta and TNFalpha exert toxic effects by binding to their cognate receptors, IL1-R1 and TNFR1, respectively, triggering downstream signaling pathways that activate transcription factors, such as NFkappaB or AP1 which in turn lead to the production of NO and ROS."
reach
"In addition, IL-1beta interaction with IL-1R1 on ECs induces migration of the cells and tube formation, mainly via activation of p38-mitogen-activated protein kinase (MAPK) and MAPK activated protein kinase 2."
sparser
"Microglia-derived IL-1β also binds to IL-1R1 on the abluminal endothelial surface, causing BMEC to release signals that further increase microglial IL-1β production and also trigger IL-6 and prostaglandin synthesis."
sparser
"The ability of Vhp19 to interfere with IL-1β binding to IL-1R was assessed and compared to inhibition of IL-1β biological activity."
reach
"The affinity of IL-1R2 for IL-1beta is 10 -10 M, while its affinity for IL-1alpha is 100 times less at 10 -8 M. IL-1R1 binds IL-1alpha at 10 -10 M, but binds IL-1beta at 10 -9 M."
reach
"The major IL-1 family members are IL-1 alpha (IL-1alpha) and IL-1 beta (IL-1beta), both of which bind to the cell surface IL-1 Receptor 1 (IL-1R1) 16."
reach
"When IL-1beta binds to IL-1R, the RhoGDI becomes phosphorylated by mechanisms that are not entirely clear and releases Rac1-GDP."
sparser
"Once extracellular, IL-1α and mature IL-1β bind to the IL-1R1 to initiate downstream signalling in a range of cell types [ xref ]."
sparser
"These residues are poorly conserved in the deduced sequences encoding halibut and other teleost IL-1β [ xref – xref ], indicating the involvement of other amino acids in the interaction between fish IL-1β and IL-1Rs."
sparser
"Herein, we describe in vitro and in vivo nonclinical Investigational New Drug (IND)-enabling studies of EBI-005, a novel protein chimera of IL-1β and IL-1 receptor antagonist (IL-1Ra or anakinra) that potently binds IL-1R1 and blocks signaling."
sparser
"Of the three forms of IL-1, soluble type II IL-1R binds IL-1 beta with highest affinity and also selectively inhibits IL-1 beta activity."
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sparser
"However, unexpectedly, the IL-1β-induced interaction between IL-1R and IL-1RAcP was unaffected in cells pretreated with brazilin ( Fig. 6 A, top left panel, fourth to sixth rows), indicating that down-regulation of IL-1β responsiveness by brazilin is independent of the heterodimerization between IL-1R and IL-1AcP."
sparser
"A model for the interaction of the extracellular parts of type I IL-1R and IL-1RAcP with IL-1β was proposed [68] ."
sparser
"IL-1R1, which binds to both IL-1α and IL-1β, can be detected in a variety of cell types, whereas the IL-1R2 is found on the cell surface of type B lymphocytes, neutrophils and macrophage, and binds with IL-1β with higher affinity[ xref ]."
sparser
"In contrast, IL-1Ra acts as an antagonist of IL-1R1, preventing the binding of IL-1α and IL-1β with IL-1R1, respectively."
sparser
"Binding of IL-1R1 with IL-1α or IL-1β leads to subsequent recruitment of IL-1RAcP at the cell membrane [ xref ] and downstream cytosolic NF-κB activation."
sparser
"IL-1ra is a cytokine produced by monocytes, macrophages, and dendritic cells, which prevents the binding of IL-1α as well as IL-1β to IL-1R1 by competitively blocking IL-1RI receptors [ xref , xref ]."
sparser
"Both IL-1α and IL-1β bind to IL-1R1 and form an activating complex with the signaling chain IL-1R3."
sparser
"Both IL-1α and IL-1β bind to same IL-1R, and bone marrow-derived macrophages produced both IL-1α and IL-1β in response to LCWE in vitro ( xref )."
sparser
"Although both IL-1α and IL-1β can interact with IL-1R1 to induce downstream transcription of inflammatory genes, they show considerable differences in their localization, regulation, and function."
sparser
"Following binding of IL-1α or IL-1β to the type I IL-1R, a second protein, the IL-1 receptor accessory protein (AcP), is recruited to the complex (Greenfeder et al., 1995) ."
sparser
"Because mice deficient in the IL-1R cannot respond to IL-1, this result demonstrated that either IL-1α or IL-1β, both of which bind to the IL-1R, contributed to acute pathology after rVSV immunization."
sparser
"IL-1α and IL-1β bind to IL-1R1 complexed to the IL-1 receptor accessory protein and induce similar physiological effects."
sparser
"Saturation binding analysis indicates an equilibrium dissociation constant (KD) of 350 pM for the binding of IL-1R-IgG to its ligand, IL-1 beta."
sparser
"Because mice deficient in the IL-1R cannot respond to IL-1, this result demonstrated that either IL-1a or IL-1b, both of which bind to the IL-1R, contributed to acute pathology after rVSV immunization."
sparser
"IL-1B and IL-1A are encoded by distinct genes and bind both to IL-1R1, found on nearly every cell and IL-1R2 ( xref )."
sparser
"Interleukin-1α (IL1α) and interleukin-1β (IL1β) both bind to IL-1R1 to initiate cell signaling."
sparser
"IL1R2 (2q11): Interleukin 1 receptor, type II binds IL1a, IL1b and IL1R1, inhibiting the activity of these ligands."
sparser
"The binding of IL-1alpha or IL-1beta to IL1R is an early step in IL-1 signal transduction and blocking this interaction may therefore be a useful target for the development of new drugs."
IL1B binds IL1R1 and IL1RN. 3 / 3
| 3
sparser
"The type I IL-1R binds IL-1α, IL-1β and the receptor antagonist IL-1Ra (reviewed in Ref. [65] )."
sparser
"In addition, IL-1R1 can be released into the extracellular space where, in its soluble form (sIL-1R1), it can also function as a soluble decoy receptor and prevent the binding of IL-1α, IL-1β, and IL-1Ra to membrane IL-1R1 ( xref )."
sparser
"On the mRNA level of MSC, we found IL1RN, which binds to IL1R on the cell surface with subsequent inhibition of the IL1beta signaling pathway, to be upregulated from a low basal level of expression upon stimulation with the PTC (318-fold) or IL1beta (107-fold) and to remain unchanged after stimulation with IL6, IL8, C3a and C5a in concentrations used in the “cocktail” ( xref )."
TLR4 binds IL1B and IL1R1. 1 / 1
| 1
sparser
"IL-1β or LPS binding to IL-1R or TLR4, respectively, results in the rapid association of the adaptor molecule Myd88 with the receptors and subsequent recruitment of the kinases IRAK1 and IRAK4. xref Activation and phosphorylation of IRAK kinases leads to the recruitment of the E3 ubiquitin ligase TRAF6 which undergoes K63-linked autoubiquitination and serves as a scaffold to recruit TAK1 and IKK kinases through binding to TAB2/3 and NEMO, respectively. xref TAK1 is subsequently activated and triggers IKK/NF-κB and mitogen-activated protein kinase/c-Jun N-terminal kinase activation. xref "
IL1B activates IL1R1.
5 17 |
IL1B activates IL1R1. 15 / 15
15 |
omnipath
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IL1B activates IL1R1. 5 / 5
5 |
bel
"The IL-1 family of receptors is comprised of ten distinct but related gene products. The receptors are indicated by the term IL-1 receptor (IL-1R) followed by a numeral, assigned chronologically by discovery, for example, IL-1R1, IL-1R2, IL-1R3, etc. The ligand binding chain for IL-1α and IL-1β is IL-1R1 and the accessory chain is IL-1R3."
bel
"After IL-1 binds to IL-1RI, an IL-1RAcP is recruited to form a high affinity IL-1R1-IL-1RAcP heterodimeric receptor, which initiates the downstream signaling cascade."
bel
"After IL-1 binds to IL-1RI, an IL-1RAcP is recruited to form a high affinity IL-1R1-IL-1RAcP heterodimeric receptor, which initiates the downstream signaling cascade."
bel
"Furthermore, IL-18R at least partly shares the signal transducing system with IL-1R. Thus, the IL-18-IL-18R system has a striking similarity to the IL-1-IL-1R system. From entrez gene summary of IL1R1: The protein encoded by this gene is a cytokine receptor that belongs to the interleukin 1 receptor family. This protein is a receptor for interleukin alpha (IL1A), interleukin beta (IL1B), and interleukin 1 receptor, type I(IL1R1/IL1RA). It is an important mediator involved in many cytokine induced immune and inflammatory responses."
bel
"Furthermore, IL-18R at least partly shares the signal transducing system with IL-1R. Thus, the IL-18-IL-18R system has a striking similarity to the IL-1-IL-1R system. From entrez gene summary of IL1R1: The protein encoded by this gene is a cytokine receptor that belongs to the interleukin 1 receptor family. This protein is a receptor for interleukin alpha (IL1A), interleukin beta (IL1B), and interleukin 1 receptor, type I(IL1R1/IL1RA). It is an important mediator involved in many cytokine induced immune and inflammatory responses."
IL1B activates IL1R1 bound to IL1RAP. 2 / 2
2 |
omnipath
No evidence text available
omnipath
No evidence text available
THBS1 affects CD47
16 | 40 8
THBS1 binds CD47.
8 | 40 8
8 | 38 7
reach
"Previous work XREF_BIBR has shown that TNF-alpha up-regulates the TSP1, CD36, and CD47 complex in cultured myoblasts and that the TSP1-CD36-CD47 was up-regulated in sIBM."
sparser
"TSP-1 and its potential membrane receptors, e.g. alphaIIbbeta3 integrin, CD36 and CD47, concomitantly associated with the actin cytoskeleton."
sparser
"Binding of CD47 to other ligands such as integrins, TSP-1 and TSP-1-derived peptides, also involves the IgV domain of CD47 [ xref ]."
sparser
"In addition, TSP-1 can also bind to different integrins, CD47 and heparan sulfated proteoglycans [ xref ]."
sparser
"To date we have validated TSP1 antibodies that block TSP1 binding to CD47, CD47 antibodies that block TSP1 binding, and antisense approaches that suppress CD47 expression [ xref , xref – xref ]."
sparser
"Finally, results show that TSP-1 utilizes cell surface receptors CD36 and CD47 to augment chemotaxis, but DBP does not bind to TSP-1, CD36 or CD47."
sparser
"Furthermore, this paper also reveals that DBP does not bind to TSP-1, CD36 or CD47 ( xref ) and that TSP-1 utilizes these cell surface receptors to augment chemotaxis to C5a ( xref – xref )."
sparser
"Ligation of CD47 by extracellular thrombospondin-1 is associated with down-regulation of IL-12 production by antigen-presenting cells [ xref ], and inhibits human naive T cell differentiation to Th1 cells but not to Th2 cells [ xref ]."
sparser
"We discussed herein the interactions of TSP-1 with well-known partners such as CD36, CD47, NO, and TGF β 1."
sparser
"Conversely, the Ca1 domain does not interact with the TSP-1 receptors CD36 and CD47, excluding their involvement in the potentiation of PDGF."
sparser
"The C-terminal domain of TSP1 binds the cell surface receptors CD36 (glycoprotein IV) and CD47 (Integrin Associated Protein, IAP, or Rh-related antigen), and both receptors have anti-angiogenic effects."
sparser
"Nevertheless, some putative side-effects of using TAX2 as an anti-cancer agent still need to be explored, particularly as TSP-1 interaction with CD47 and/or CD36 is also known to modulate platelet aggregation ( xref )."
sparser
"In endothelial cells, TSP-1 can bind to CD36 and CD47 through its type-1 repeats and carboxyl-terminal domain to inhibit cell proliferation and promote anti-angiogenic events xref , xref ."
sparser
"Through its original mechanism of action which supposes concomitant disruption of TSP-1:CD47 interaction and enhancement of CD36 activation by TSP-1, TAX2 may inhibit tumor progression while limiting many of the undesired side effects of broadly inhibiting important physiological functions of CD47."
sparser
"Inhibition of TSP-1 binding to either CD36 or CD47 using peptide mimics of the binding sites was investigated next."
sparser
"This might be of utmost importance for the contributions of endothelial cell-mediated angiogenesis following TSP-1 binding to CD36 and CD47."
sparser
"We studied two peptides interacting with CD36, CSVTCG and GDGV(dI)TRIR [11,16] and 4N1-1, one of the two CD47 binding sites of TSP-1 [15] ."
sparser
"These results indicate that that TSP-1 cell surface binding to CD36 and CD47 is essential for chemotaxis enhancement, and suggest that CD36 may be the more important of the TSP-1 receptors for enhancing chemotaxis to C5a."
sparser
"Because CD47 is known to associate laterally with other signaling receptors, including VEGFR2, and TSP1 binding to CD47 inhibits VEGFR2 signaling by dissociating CD47 xref , we hypothesized that interaction of CD47 with the CD14 complex might similarly modulate signal one."
sparser
"TSP-1 binds CD47 to inhibit the release of interleukin (IL)-2 ."
sparser
"These activities are mediated, at least in part, by interactions of TSP1 with CD47 and HSPGs on T cells (this study; xref )."
sparser
"The increase in capillarity may be associated by changes in the interaction between VEGF-A, TSP-1, and CD47."
sparser
"Additional studies are required to investigate the signaling mechanism of (−)-epicatechin on the VEGF-A-TSP-1-CD47 interaction as well as determine the prolonged effects upon cessation."
sparser
"TSP-1 and SIRP-α bind CD47 IgV loop xref and TSP-1 can inhibit SIRP-α-Fc binding to CD47 expressing-Jurkat cells xref ."
sparser
"The binding of CD47 to either SIRPα or TSP1 provides two anticancer strategies."
sparser
"Given recent insights into the physiological functions of CD47, potential side effects of therapeutic CD47-antibodies such as B6H12, which inhibits both CD47-SIRP and CD47-TSP1 interactions, include altered blood pressure [ xref ], hemolytic anemia, and prothrombotic or antithrombotic activities [ xref , xref ]."
sparser
"Interestingly, both TSP-1 and SIRPα are interacting with CD47 during synaptogenesis xref , xref , xref , xref , which means that other mechanisms appear to be involved in CD47-dependent regulation of the type of nerve fiber growth investigated in the present study."
sparser
"Notably, the widely used CD47 blocking antibody B6H12 inhibits binding of both SIRPα and TSP1 to cell surface CD47 ( xref )."
sparser
"However, CD47 modified nanoparticles showed a prominent anti-phagocytosis property in M1 cells that may in part be due to the complex signalling interactions of CD47 with SIRPα and TSP-1."
sparser
"One approach to avoid these shortcomings is to identify and develop small molecule molecular probes and pretherapeutic agents that would (1) selectively target SIRPα or TSP1 interactions with CD47, (2) provide a route to optimize pharmacokinetics, reduce on-target toxicity and maximize tissue penetration, and (3) allow more flexible routes of administration."
sparser
"This data is consistent with competitive binding of TSP1 and SIRPα to a single site on CD47, steric inhibition of binding to distinct but proximal sites, or allosteric inhibition ( xref )."
sparser
"Thus, we propose that treatment of tumor-bearing animals with CD47 blocking antibodies, which are known to inhibit both SIRPα and TSP1 binding to CD47, could directly modulate adaptive as well as innate anti-tumor immunity."
sparser
"Indeed, CD47 antibody targeting may affect NO pathway modulation and subsequent angiogenesis regulation, since a commonly used CD47-blocking antibody (clone B6H12) was previously shown to concomitantly disrupt both TSP-1:CD47 and CD47:SIRPα interactions ( xref )."
sparser
"The COOH-terminal domain of TSP-1 binds to CD47, also known as integrin-associated protein [ xref ]."
sparser
"The COOH-terminal domain of TSP-1 binds to CD47, also known as integrin-associated protein. [ xref ] This domain also interacts with integrins such as β 1 and β v6 integrins and actively binds to proteoglycans allowing cell adhesion and spreading [ xref ]."
sparser
"TSP1 can also interact with integrin-bound fibrinogen, which may further increase clustering between IAP and αIIb/β3."
reach
"This anti-angiogenic activity results in part from the ability of physiological concentrations of TSP1 binding to CD47 to control NO signaling, which is necessary for signaling by several pro angiogenic factors [XREF_BIBR]."
sparser
"Otherwise, TSP-1 binding to CD47 also inhibits differentiation of naïve T cells into Th1 ( xref ), whereas Tregs formation is induced by promoting Foxp3 transcription factor expression ( xref ; xref )."
reach
"We have previously identified TAX2 peptide as an orthosteric antagonist for thrombospondin-1 (TSP-1) interaction with the cell-surface receptor CD47."
reach
"56 It would be interesting to investigate the effect of CD47 blockade on the antitumour capabilities of T cells, as previous studies have suggested that CD47 negatively regulates the differentiation of Th1 CD4 + T cells 195 and interacts with TSP-1 to inhibit T cell proliferation."
reach
"For example, B6H12 inhibits binding of TSP1 to human CD47, and TSP1 binding to CD47 inhibits NO signaling in vascular endothelial cells."
sparser
"Thus, we sought to identify an innovative selective antagonist for TSP-1:CD47 interaction."
sparser
"TSP1 binding to CD47 has global functional consequences by inhibiting endothelial nitric oxide (NO) production, controlling vascular tone, and maintaining systemic hemodynamics and cardiac dynamics in stressful conditions [ xref , xref , xref , xref ]."
reach
"The rule for TSP1 binding to CD47 is illustrated in Figure XREF_FIG."
reach
"The binding of CD47 to either SIRPalpha or TSP1 provides two anticancer strategies."
omnipath
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THBS1 binds THBS1 and CD47. 1 / 1
| 1
sparser
"Some studies demonstrate increased angiogenesis associated with TSP-1 overexpression (reviewed in [ xref ]), which could be due to the TSP1-dependent CD47 ligation, which may increase the motility and invasiveness of the tumor cells [ xref ]."
THBS1 binds CALR and CD47. 1 / 1
| 1
sparser
"These results unveil an autocrine mechanism of calreticulin-thrombospondin-1-CD47 interaction for the control of T cell motility and migration within three-dimensional extracellular matrix substrata."
THBS1 binds CD47 and CD47. 1 / 1
| 1
reach
"In chondrocytes, a TSP, CD47, and IAP complex may associate with alpha5beta1 integrin to modulate alterations in integrin affinity and avidity state critical in the mechanotransduction process."
THBS1 activates CD47.
8 |
THBS1 activates CD47. 8 / 8
8 |
omnipath
No evidence text available
omnipath
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omnipath
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omnipath
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omnipath
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omnipath
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omnipath
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omnipath
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TNF affects TLR4
4 | 31 1
TNF binds TLR4.
| 31 1
| 28 1
sparser
"Data revealed that the TNFA expression was associated with the co-expression of TLR4 and IL4 under physiological conditions."
sparser
"We found that the expression of TLR4 was associated with the co-expression of TNFA and IL4 under both basic and physiological conditions."
sparser
"Of relevance, recent work shows that in lipopolysaccharide-stimulated mouse macrophages, TLR4 interacts initially with MyD88 to mediate the early phase TNF expression and then with the newly induced 4-1BBL to sustain longer term TNF production xref ."
sparser
"This decrease in TNF-α levels was not associated with a reduction in cell surface expression of CD14 and Toll-like receptor 4."
sparser
"In this work, further analysis showed that the addition in multivariable regression models of percent monocytes and lymphocytes did not modify the associations of DNA methylation of CD14, TLR4 and TNF-α."
sparser
"Endotoxin release in a compromised gut triggers an inflammatory cascade following binding to TLR4 and CD14 which results in the upregulation of TNFα expression ( xref )."
sparser
"In order to define if the inhibitory effects of SB203850 on LPS-induced IL-1 β, IL-6 , TNF -α and TLR-4 transcription could be exclusively associated to LITAF activity or if it could be the result of LITAF interaction with the master pro-inflammatory transcription factor NF-ĸB, we performed in vitro experiments on LX-2 cells with sulfasalazine (SZA)."
sparser
"Hepatic TLR2, TLR4 and TNF-α mRNA are associated with hepatic inflammation in both HCV and HCV/HIV infection."
sparser
"Furthermore, the association of TLR2 and TLR4 with TNF-α production was most apparent in patients with active VL as the agonists stimuli increased production compared with the other groups."
sparser
"Melanoma growth was associated with a significant reduction in TNF-α, TLR-2 and TLR-4 mRNA expression in peritoneal macrophages compared to that in control mice ( P  < 0.05)."
sparser
"Moreover, therapeutic effects of Gal-LipoNP TLR4 siRNA were associated with suppression of the inflammatory cytokines IL-1 and TNF-α."
sparser
"TLR1, TLR4 (1 of 4 SNPs) and TNF (1 of 4 SNPs) interacted with cigarette smoking."
sparser
"Also, in mice, during experimental OM, persistent inflammatory responses of TLR2 –/– and TLR4 –/– mice were associated with an initial lack of induction of TNF after infection [ xref ]."
sparser
"The TLR4 +896 and TNF-alpha -308 polymorphisms were significantly associated with an increased risk for severe sepsis following burn trauma."
sparser
"Impaired TLR4-induced TNF production was associated to the lack of intracellular dynamin-dependent TLR-4 receptor trafficking to perinuclear regions in BMMCs, a diminished ERK1/2 and ELK-1 phosphorylation, and a decrease in c-fos and TNF mRNA accumulation."
sparser
"Down-regulation of TLR-4 by TNF-alpha is associated with LPS hyporeactivity for NF-kappaB formation, whereas upregulation of TLR-4 via IL-6 can increase the responsiveness of mononuclear phagocytes."
sparser
"The TNF superfamily member 4-1BBL physically interacts with TLR4."
sparser
"In the patient group, TNFA promoter genotypes -238 G/G and -376 G/G and the TLR4 299 A/A genotype were associated with an otitis-prone condition."
reach
"These macrophages had decreased SM content in their cells and have reduced recruitment of TLR4 and TNF receptor to the cellular membrane."
sparser
"Polymorphisms TNF-A-308G/A, IL-8-251A/T, TNF-B + 252A/G and TLR4 + 1196C/T were not associated with risk of any gastric lesion."
sparser
"These findings suggest that the expression of TNFA was mainly associated with TLR4 expression in BOECs under various experimental conditions."
sparser
"The expression of TLR4 was associated with the mRNA expression of TNFA (under physiological or pathophysiological + physiological conditions), IL4 (under physiological conditions), and IL1B (under pathophysiological conditions)."
sparser
"To further understand the mechanism of action of the Fcgr3-rs, we then investigated how the Fcgr3 and Fcgr3-rs interact with TLR4-mediated TNFα production following LPS stimulation."
sparser
"To investigate whether TLR4 associated with IL-1 β and TNF- α expression induced by LPS, we pre-treated SFs with TAK-242 (1  μ M) for 2 h prior to LPS exposure."
sparser
"Moreover, using the co-expression data of gene pairs, the data showed that the co-expression of IL1B and TNFA (under pathophysiological conditions), the co-expression of TNFA and IL4 (under physiological conditions), and the co-expression of TNFA and IL10 (under pathophysiological + physiological conditions) was strongly associated with TLR4 expression."
sparser
"The results showed that TNFA ( d  = 0.61) and TLR4 ( d  = 0.34) were negatively associated with IL10 expression under basic conditions ( P  < 0.05)."
sparser
"Failure otitis media recovery in TLR2 −/− and TLR4 −/− mice is associated with decreased TNF and enhanced IL-10 expression, suggesting that abnormalities of innate immunity may contribute to otitis media in humans and that innate immune pathways could be targets of otitis media therapy."
sparser
"Of the several isoforms of protein kinase C, protein kinase C epsilon (PKCε) is the PKC isoform ( xref ) that is associated with the Toll-like receptor 4, IL-12, and TNF-α mediated immune and inflammatory responses ( xref )."
sparser
"The basal up-regulation of TLR4 expression associated with endogenous high TNF-α and IL-12p70 production by monocytes from preeclamptic women confirms the activated profile of these cells by the disease process."
TLR4 binds TNF and TNF. 1 / 1
| 1
sparser
"TLR4 expression was associated with TNF-α and TNF-β expression (p = 0.016 and p = 0.025, respectively) in these 2 groups."
TLR4 binds TNF and IL1B. 1 / 1
| 1
sparser
"The second principal component indicates that the high expression of TLR-4 was associated with high expression of pro-inflammatory cytokines TNF-α and IL-1β ."
TLR4 binds TNF and NR3C2. 1 / 1
| 1
sparser
"All three receptors influenced the production of IL-10, while TNF-α production was associated with expression of TLR4 and MR."
TNF increases the amount of TLR4.
3 |
Transcriptionally active TNF increases the amount of TLR4. 3 / 3
3 |
biopax:ctd
No evidence text available
biopax:ctd
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biopax:ctd
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TNF decreases the amount of TLR4.
1 |
Transcriptionally active TNF decreases the amount of TLR4. 1 / 1
1 |
biopax:ctd
No evidence text available
TNF affects INSR
1 | 9 11
TNF binds INSR.
| 7 1
| 7 1
sparser
"A non-TNFi biologic agent may hence be a preferential next-line treatment for TNF-IR patients."
sparser
"The HIRMAb-TNFR fusion protein binds both the HIR and TNFα with low nM affinity."
sparser
"Actual and potential interactions between cell receptor signaling pathways (receptor cross-talk): interaction between TNF-α and the insulin receptor."
reach
"Actual and potential interactions between cell receptor signaling pathways (receptor cross-talk) : interaction between TNF-alpha and the insulin receptor."
sparser
"The outcomes of 56 TNF-IR patients were analysed."
sparser
"To compare therapeutic efficacy of tumour necrosis factor inhibitor (TNFi) cyclers and non-TNFi switchers in patients with rheumatoid arthritis (RA) having inadequate response to previous TNFis (TNF-IR patients) using composite measures including imaging assessment with power Doppler ultrasonography (PDUS)."
sparser
"Donnahoo et al. [9] have shown that I–R-induced renal TNF production was associated with impaired renal function and TNF-binding protein restored creatinine clearance."
sparser
"TNF effect on IRS-1 in Fao hepatoma cells was not associated with a significant reduction in insulin receptor tyrosine kinase activity as measured in vitro but impaired the association of IRS-1 with phosphatidylinositol 3-kinase, localizing TNF impact to IRS-1."
TNF dephosphorylates INSR.
| 7
TNF dephosphorylates INSR. 7 / 7
| 7
reach
"Insulin resistance is one of the first consequences of sustained inflammation, since pro inflammatory cytokines such as interleukins, and TNF-alpha abrogate insulin receptor phosphorylation and post-receptor action, leading to altered lipid storage, lipid spillover and dyslipidemia (Garbossa & Folli, 2017; Paniagua, 2016)."
reach
"TNF-alpha has been shown to induce the expression of SOCS-3 (Suppressor of cytokine signalling-3), which specifically inhibits insulin receptor phosphorylation [XREF_BIBR]."
reach
"TNF-alpha activates c-Jun N-terminal kinase (JNK) to phosphorylate and suppress the activity of insulin receptor (IR) substrate 1."
reach
"In addition, TNF-alpha mediates insulin resistance by reducing insulin receptor kinase activity, down-regulating insulin receptor substrate (IRS) -1 and GLUT-4 phosphorylation and activity, and inducing lipolysis 2."
reach
"Sequential studies showed that TNFalpha not only decreased the amount of (tyrosine) phosphorylation of the insulin receptor substrate (IRS) [13] but also initiated serine phosphorylation of IRS, which inhibited insulin signaling [14]."
reach
"Increased TNFalpha causes an adipocyte specific decrease in insulin receptor phosphorylation; decreased insulin receptor function; resistance to the antilipolytic effects of insulin; de-repression of adipocyte hormone sensitive lipase; increased, continuous lipolysis of the enlarged adipocyte TG mass; and a further increase in plasma LCFA."
reach
"Mechanistically, TNFalpha contributes to insulin resistance by inhibiting the activating phosphorylation of the insulin receptor and insulin receptor substrate 1 (IRS1) in muscle and adipose tissues [XREF_BIBR]."
TNF phosphorylates INSR.
1 | 2 3
TNF phosphorylates INSR. 6 / 6
1 | 2 3
bel
"Analysis of intestinal tissue in TNF-alpha-treated hamsters indicated impaired phosphorylation of insulin receptor-beta, insulin receptor substrate-1, Akt, and Shc and increased phosphorylation of p38, extracellular signal-related kinase-1/2, and Jun NH(2)-terminal kinase."
reach
"some of the insulin resistance induced by the p60 TNF Moreover, staurosporin, a non specific inhibitor of pro- receptor; treatment of hepatoma cells and 3T3-L1 adipo- tein kinase C, did not abrogate the ability of TNF to cytes with sphingomylinase or cell-permeable analogs of inhibit insulin stimulated phosphorylation in Fao hepa- Inhibition of IR Signaling by TNF 169 p80 ~ ~ TNFRI I [I TNFR IIII (~)."
sparser
"In the same adipocytes or surrounding skeletal muscle cells, TNF-α may increase serine phosphorylation of the insulin receptor and also of IRS-1 and possibly other proteins that mediate intracellular insulin signaling."
reach
"This is true for TNF-alpha, which acts on the insulin receptor and prevents the dephosphorylation of insulin receptor substrates, thus blocking receptor signaling and preventing glucose entry into the cell (insulin resistance)."
reach
"Tumor necrosis factor alpha (TNFalpha) or chronic hyperinsulinemia that induce insulin resistance trigger increased Ser/Thr phosphorylation of the insulin receptor (IR) and of its major insulin receptor substrates, IRS-1 and IRS-2."
sparser
"Furthermore, TNF-α induced serine phosphorylation of IR and IRS-1, and these effects were completely precluded by pretreatment with inhibitors of p38 MAPK."
THBS1 affects LRP1
1 4 | 7 9
1 4 | 5 9
sparser
"If cell surface LRP1 is protected by an MMP/ADAM inhibitor, and TSP-1 transport to the cell surface simultaneously is stimulated by cell contact with β1 and β2 integrin ligands, TSP-1 associates heavily with LRP1 ( xref )."
sparser
"Moreover, the CRT mutations could also affect CRT binding to LRP1, thereby, disrupting the formation of the TSP1-CRT-LRP1 ternary complex for signaling the cellular activities ( xref )."
omnipath
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omnipath
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omnipath
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omnipath
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reach
"This is because TSP1, even when bound to VEGF, can bind to LRP1, increasing the number of anti-angiogenic receptor complexes, despite having a limited effect on the percentage of free or receptor bound VEGF."
reach
"Further, high affinity binding of TSP-1 to LRP likely results from the trimeric structure of TSP-1."
sparser
"Solid-phase binding assays confirmed that LRP bound to TSP1 and that the interaction was of high affinity (Kd = 5 nM)."
reach
"Although the NH 2 -terminal heparin binding domain of TSP binds LRP, and LRP mediates the endocytic degradation of TSP1 and 2, our analyses failed to demonstrate binding between LRP and the hep I sequence from the NH 2 -terminal heparin binding domain of TSP."
hprd
No evidence text available
reach
"This is because TSP1 binding to LRP1 leads to internalization, removing TSP1 from the tissue and influencing its availability to bind to other species."
reach
"Thus, LRP1 can bind, internalize, and degrade TSP1 through LRP1 binding to the NTD of TSP1."
reach
"For example, a pro migratory signal is generated when LRP1 binds and internalizes the complex of cell surface calreticulin and thrombospondin-1 in coronary artery endothelial cells."
reach
"These results indicate that TSP-1 binding to LRP-1 does not require prior or concomitant interaction with cell surface HSPG but suggest subsequent endocytosis requires high-affinity heparin binding."
sparser
"More importantly, the use of a system of astrocyte-neurons co-cultures indicated that astrocytes activated upon uPA/uPAR binding release thrombosponin-1 (TSP-1), and that the interaction between astrocytic TSP-1 and synaptic LRP1 promotes synaptic recovery in neurons that have suffered a hypoxic injury [ xref ]."
reach
"Formation of the ANXA6, LRP1, and TSP1 complex was restricted to cancer associated fibroblasts (CAFs) and required physiopathologic culture conditions that improved tumor cell survival and migration."
reach
"Increased PDA aggressiveness was dependent on tumor cell mediated uptake of CAF derived ANXA6+ EVs carrying the ANXA6, LRP1, and TSP1 complex."
sparser
"In addition, the TSP1 domain of CCN2 binds to LRP1, which acts as a co-repressor of the Frizzled receptor and downregulates Wnt signaling [ xref , xref ]."
THBS1 binds CALR and LRP1. 2 / 2
| 2
sparser
"For example, a pro-migratory signal is generated when LRP1 binds and internalizes the complex of cell surface calreticulin and thrombospondin-1 in coronary artery endothelial cells ( xref , xref )."
sparser
"The N-terminal domain of TSP1 binds to the calreticulin-LRP1 receptor co-complex to signal down-regulation of cell adhesion and increased cell motility through focal adhesion disassembly."
IL1RN affects IL1R1
18 | 3
IL1RN binds IL1R1.
9 | 3
9 |
omnipath
No evidence text available
omnipath
No evidence text available
omnipath
No evidence text available
omnipath
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omnipath
No evidence text available
omnipath
No evidence text available
omnipath
No evidence text available
omnipath
No evidence text available
omnipath
No evidence text available
IL1B binds IL1R1 and IL1RN. 3 / 3
| 3
sparser
"The type I IL-1R binds IL-1α, IL-1β and the receptor antagonist IL-1Ra (reviewed in Ref. [65] )."
sparser
"In addition, IL-1R1 can be released into the extracellular space where, in its soluble form (sIL-1R1), it can also function as a soluble decoy receptor and prevent the binding of IL-1α, IL-1β, and IL-1Ra to membrane IL-1R1 ( xref )."
sparser
"On the mRNA level of MSC, we found IL1RN, which binds to IL1R on the cell surface with subsequent inhibition of the IL1beta signaling pathway, to be upregulated from a low basal level of expression upon stimulation with the PTC (318-fold) or IL1beta (107-fold) and to remain unchanged after stimulation with IL6, IL8, C3a and C5a in concentrations used in the “cocktail” ( xref )."
IL1RN inhibits IL1R1.
9 |
IL1RN inhibits IL1R1. 9 / 9
9 |
omnipath
No evidence text available
omnipath
No evidence text available
omnipath
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omnipath
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omnipath
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omnipath
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omnipath
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omnipath
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omnipath
No evidence text available
IL1B affects TLR4
3 | 10 6
IL1B binds TLR4.
| 10 6
| 8 6
sparser
"The four SNPs that had significant single SNP associations with either IL-1α (IL-1RAP rs6444435) or IL-1β (IL-1R2 – rs4851527 and rs4851531, IL-1RAP – rs6765375) in AA were tested for interaction effects with the two SNPs in TLR4 (rs1554973 and rs7856729) that were associated with IL-1α and IL-1β in European Americans in a previous study ( xref [pd1] )."
reach
"The gram negative bacterial cell wall component LPS and IL-1beta, which bind to Toll Like Receptor 4 (TLR4) and the IL-1 Type-I receptor (IL-1RI), respectively, play a pivotal role in this process."
sparser
"The gram-negative bacterial cell wall component LPS and IL-1β, which bind to Toll-Like Receptor 4 (TLR4) and the IL-1 Type-I receptor (IL-1RI), respectively, play a pivotal role in this process."
reach
"Our results also propose that IL-1beta may bind to TLR4, in addition to its cognate receptor IL-1R1, to exert its inflammatory effects in microglia, which is a novel finding and needs to be further explored."
sparser
"Our results also propose that IL-1β may bind to TLR4, in addition to its cognate receptor IL-1R1, to exert its inflammatory effects in microglia, which is a novel finding and needs to be further explored."
reach
"The association between precancerous gastric lesions and serum pepsinogens, serum gastrin, vascular endothelial growth factor, serum interleukin-1 Beta, serum toll like receptor-4 levels and Helicobacter pylori Cag A status."
reach
"The four SNPs that had significant single SNP associations with either IL-1alpha (IL-1RAP rs6444435) or IL-1beta (IL-1R2 - rs4851527 and rs4851531, IL-1RAP - rs6765375) in AA were tested for interaction effects with the two SNPs in TLR4 (rs1554973 and rs7856729) that were associated with IL-1alpha and IL-1beta in European Americans in a previous study."
reach
"6 Binding of IL-1beta to IL-1R or LPS to TLR4 causes recruitment of adopter proteins such as MyD88, IRAK, and TRAF6 to the receptor."
reach
"The aim of this study was to investigate the association between serum pepsinogens, serum gastrin, serum vascular endothelial growth factor, serum interleukin-1 Beta, serum toll like receptor-4 levels and Helicobacter pylori Cag A status in patients with various gastric precancerous lesions."
sparser
"Functional studies revealed that this NFKBIA rs2233406 genotype was associated with elevated TLR4-mediated IL-1β production."
sparser
"Although HMGB1 has been shown to stimulate pro-inflammatory cytokine production xref , xref , xref , it is unlikely that HMGB1 interacts with TLR4 to promote IL-1β production and cell death in our system."
sparser
"Since previous reports showed that the production of IL-1β is associated with TLR2 and TLR4 pathway [ xref ], we thus speculated that the inhibitory effect of ischemic postconditioning on the IL-1β production might be correlated with inhibition of TLR2 or TLR4 pathway."
sparser
"Elevated production of IL-1β from monocytes following TLR-2, TLR-4 and TLR-7/8 stimulation was associated with reduced odds of TB recurrence."
sparser
"Both types of glial cells release Tnf and produce the immature form of Il1b in a Tlr4-dependent manner in the presence of Hsp70."
TLR4 binds TNF and IL1B. 1 / 1
| 1
sparser
"The second principal component indicates that the high expression of TLR-4 was associated with high expression of pro-inflammatory cytokines TNF-α and IL-1β ."
TLR4 binds IL1B and IL1R1. 1 / 1
| 1
sparser
"IL-1β or LPS binding to IL-1R or TLR4, respectively, results in the rapid association of the adaptor molecule Myd88 with the receptors and subsequent recruitment of the kinases IRAK1 and IRAK4. xref Activation and phosphorylation of IRAK kinases leads to the recruitment of the E3 ubiquitin ligase TRAF6 which undergoes K63-linked autoubiquitination and serves as a scaffold to recruit TAK1 and IKK kinases through binding to TAB2/3 and NEMO, respectively. xref TAK1 is subsequently activated and triggers IKK/NF-κB and mitogen-activated protein kinase/c-Jun N-terminal kinase activation. xref "
IL1B increases the amount of TLR4.
3 |
Transcriptionally active IL1B increases the amount of TLR4. 3 / 3
3 |
biopax:ctd
No evidence text available
biopax:ctd
No evidence text available
biopax:ctd
No evidence text available
LRP1 affects CALR
1 6 | 7 4
1 6 | 5 4
bel
"Removal of apoptotic cells is essential for maintenance of tissue homeostasis, organogenesis, remodeling, development, and maintenance of the immune system, protection against neoplasia, and resolution of inflammation. The mechanisms of this removal involve recognition of the apoptotic cell surface and initiation of phagocytic uptake into a variety of cell types. Here we provide evidence that C1q and mannose binding lectin (MBL), a member of the collectin family of proteins, bind to apoptotic cells and stimulate ingestion of these by ligation on the phagocyte surface of the multifunctional protein, calreticulin (also known as the cC1qR), which in turn is bound to the endocytic receptor protein CD91, also known as the alpha-2-macroglobulin receptor. Use of these proteins provides another example of apoptotic cell clearance mediated by pattern recognition molecules of the innate immune system. Ingestion of the apoptotic cells through calreticulin/CD91 stimulation is further shown to involve the process of macropinocytosis, implicated as a primitive and relatively nonselective uptake mechanism for C1q- and MBL-enhanced engulfment of whole, intact apoptotic cells, as well as cell debris and foreign organisms to which these molecules may bind."
sparser
"It is not surprising that both calnexin and calreticulin associate with LRP because of their broad substrate specificity; the list of glycoproteins currently known to interact with calnexin and calreticulin is extensive, and no particular type of N-glycoprotein (soluble lysosomal, secreted, bound to internal or plasma membranes, etc.) is thought to be excluded [50] ."
reach
"It is not surprising that both calnexin and calreticulin associate with LRP because of their broad substrate specificity; the list of glycoproteins currently known to interact with calnexin and calreticulin is extensive, and no particular type of N-glycoprotein (soluble lysosomal, secreted, bound to internal or plasma membranes, etc.) is thought to be excluded [50]."
sparser
"Furthermore, in a recent study, Yuan and colleagues applied colloidal NPs to develop a multivalent bispecific nanobioconjugate engager (mBiNE) composed of colloidal NPs conjugated with a HER2-specific antibody and a calreticulin-binding low-density lipoprotein receptor-related protein 1 (LRP1) that specifically binds the cell surface HER2 protein and pro-phagocytosis-mediating calreticulin.[ xref ] Treatment of tumor-bearing mice with mBiNE promoted receptor-targeted phagocytosis of cancer cells by macrophages and, consequently, enhanced antigen processing and presentation by APCs."
sparser
"Phagocytosis of shCD47-1 and shCD47-2 Raji cells was dependent on the calreticulin-LRP interaction as the observed phagocytosis was completely abrogated in the presence of a CRT blocking peptide ( xref )."
reach
"TSP-1 also signals through calreticulin and LRP1 complex to activate cell-survival signals in fibroblasts and to increase their migration [XREF_BIBR], and this mechanism may also contribute to pro fibrotic activities of TSP-1 during repair and remodeling processes."
reach
"Other opsonins that are known to mediate phagocytosis via MerTK are growth arrest specific protein 6 and Protein S, which bind to exposed phosphatidylserine, whereas vitronectin receptors bind to exposed phosphatidylserine via the opsonin MFG-E8, the LRP1 receptor binds to calreticulin exposed on cells, and the CR3 receptor binds to iC3b opsonized and, possibly, C1q opsonized cells."
sparser
"Macrophages can be activated by the interaction of calreticulin and LRP."
reach
"Hence, chemokines and integrin ligands up-regulate a dominant motogenic pathway through LRP1 and TSP-1 cleavage and activate an associated adhesion pathway through the LRP1 and calreticulin complex, intact TSP-1 and CD47."
omnipath
No evidence text available
omnipath
No evidence text available
omnipath
No evidence text available
omnipath
No evidence text available
omnipath
No evidence text available
omnipath
No evidence text available
sparser
"These drug-gene links are based on the binding of the LRP1 and CALR proteins to tPA in in-vitro models xref , xref and the physiological relevance of these interactions have not been established (for further discussion on the limitations of drug-gene interaction databases see below)."
THBS1 binds CALR and LRP1. 2 / 2
| 2
sparser
"For example, a pro-migratory signal is generated when LRP1 binds and internalizes the complex of cell surface calreticulin and thrombospondin-1 in coronary artery endothelial cells ( xref , xref )."
sparser
"The N-terminal domain of TSP1 binds to the calreticulin-LRP1 receptor co-complex to signal down-regulation of cell adhesion and increased cell motility through focal adhesion disassembly."
TNF affects GPR68
7 | 10
TNF increases the amount of GPR68. 10 / 10
| 10
reach
"OGR1 expression induced by TNF, PMA, or LPS was prevented by treatment with PI-3 (Akt1/2), MAP, and PKC inhibitors and with NF-kappaB inhibitors AICAR, BAY-11-7082, CAY10512, and SC-514."
reach
"TNF upregulates OGR1 expression for short periods (6-12 h); however, the effect is not sustained for longer periods, after 24 to 48 hours OGR1 expression returns to basal levels."
reach
"XREF_BIBR In thecurrent study we show that hypoxia enhances TNF mediated induction of OGR1 expression, and that this effect was reversed by NF-kappaB inhibition under hypoxic conditions."
reach
"XREF_BIBR, XREF_BIBR We show that hypoxia enhances TNF mediated induction of OGR1 expression."
reach
"The enhancement of TNF- and hypoxia induced OGR1 expression under low pH points to a positive feed-forward regulation of OGR1 activity in acidic conditions, and supports a role for OGR1 in the pathogenesis of IBD."
reach
"OGR1 expression is induced in cells of human macrophage lineage and primary human monocytes by TNF."
reach
"We previously reported that OGR1 expression was induced in cells of human macrophage lineage and primary human monocytes by TNF and that NF-kappaB inhibition reversed the induction of OGR1 mRNA expression by TNF."
reach
"NF-kappaB inhibition reverses the induction of OGR1 expression by TNF."
reach
"In a previous study we reported that TNF treatment induced OGR1 expression in MM6 cells and primary human and murine monocytes, and that this process was reversed by the NF-kappaB inhibitors MG132, AICAR, BAY-11-7082, CAY10512, and SC-514 in MM6 cells."
reach
"The stimulation of OGR1 expression by TNF and hypoxia, and subsequent pH sensing activity, may play a role in IBD pathogenesis."
Transcriptionally active TNF increases the amount of GPR68. 7 / 7
7 |
biopax:ctd
No evidence text available
biopax:ctd
No evidence text available
biopax:ctd
No evidence text available
biopax:ctd
No evidence text available
biopax:ctd
No evidence text available
biopax:ctd
No evidence text available
biopax:ctd
No evidence text available
TNF affects F3
10 | 4 3
TNF increases the amount of F3.
10 |
Transcriptionally active TNF increases the amount of F3. 10 / 10
10 |
biopax:ctd
No evidence text available
biopax:ctd
No evidence text available
biopax:ctd
No evidence text available
biopax:ctd
No evidence text available
biopax:ctd
No evidence text available
biopax:ctd
No evidence text available
biopax:ctd
No evidence text available
biopax:ctd
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biopax:ctd
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biopax:ctd
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TNF binds F3.
| 4 3
TNF binds F3. 7 / 7
| 4 3
reach
"We found an association between TIMP-1 and APACHE-II (rho = 0.33; P = 0.001), TF (rho = 0.43; P < 0.001) and TNF-alpha (rho = 0.43; P < 0.001) (XREF_TABLE)."
reach
"Based on the present findings, we suppose that the brain region specific methylation state of solitary CpGs in the TNF-alpha promoter determines the efficacy of TF binding and thus TNF-alpha expression."
sparser
"However, in our series only lenalidomide induced upregulation of TNFα, sVCAM1, and TF were significantly associated with subsequent thrombosis ( xref )."
reach
"Besides, an association between TIMP-1 and APACHE-II (rho = 0.33; P = 0.001), TF (rho = 0.43; P < 0.001), and TNF-alpha (rho = 0.43; P < 0.001) was found in our study."
sparser
"We have also demonstrated that miR-19b upregulation induced by TNF-α is associated with TF gene transcription and miR-19b can inhibit TF expression by prompting TF mRNA degradation in ECs."
sparser
"However, addition of calcitriol or paricalcitol blunted the TNF-α-induced TF expression and activity (2.01 ± 0.24 and 1.32 ± 0.14 vs. 3.02 ± 0.39 pmol/mg protein, P < 0.05), which was associated with down-regulation of NF-κB signaling and PAR-2 expression, as well as with restored levels of vitamin D receptor and enhanced expression of TF pathway inhibitor."
sparser
"However, upon treatment with calcitriol and paricalcitol, TNF-α-induced TF expression and activity associated with downregulation of NF-κB signaling and PAR-2 expression were significantly blunted, the levels of VDR were restored, and the expression of TF pathway inhibitor (TFPI) was enhanced [ xref ]."
IL1B affects F3
10 | 7
IL1B increases the amount of F3.
10 |
Transcriptionally active IL1B increases the amount of F3. 10 / 10
10 |
biopax:ctd
No evidence text available
biopax:ctd
No evidence text available
biopax:ctd
No evidence text available
biopax:ctd
No evidence text available
biopax:ctd
No evidence text available
biopax:ctd
No evidence text available
biopax:ctd
No evidence text available
biopax:ctd
No evidence text available
biopax:ctd
No evidence text available
biopax:ctd
No evidence text available
IL1B binds F3.
| 7
F3 binds IL1B. 7 / 7
| 7
sparser
"In the presence of IL-1β, however, additional treatment with AM-630 as well as the combination of AM-251 and AM-630 was associated with a further significant increase of IL-1β-induced TF protein levels (Figure xref )."
sparser
"Whereas treatment of cells with nSMase spiroepoxide inhibitor was associated with a substantial suppression of IL-1β-induced TF formation, fumonisin B 1 and ISP-1 failed to elicit such effect (Figure xref )."
sparser
"Subsequent experiments revealed WIN 55,212-2 to impair the phosphorylation of p38 MAPK and JNK thereby proving an additional target of the cannabinoid in interfering with TF formation by IL-1β."
sparser
"In addition, the stimulatory effect of ceramide on basal and IL-1β-induced TF protein formation was confirmed by incubating cells with nSMase from B. cereus (Figure xref )."
sparser
"First, treatment of cells with nSMase spiroepoxide inhibitor [ xref ], which selectively inhibits the nSMase-catalyzed hydrolysis of membrane sphingomyelin to ceramide, was associated with a substantial suppression of IL-1β-induced TF formation and cellular ceramide levels."
sparser
"Whereas treatment of cells with nSMase spiroepoxide inhibitor was associated with a substantial suppression of IL-1β-induced TF formation, fumonisin B 1 and ISP-1 failed to elicit such effect (Figure xref )."
sparser
"According to Figure xref , inhibition of all kinases was associated with a partial but significant inhibition of IL-1β-induced TF formation with the most pronounced effect observed with the p38 MAPK inhibitor."
TNF affects TRPV1
| 5 11
TNF increases the amount of TRPV1.
| 9
TNF increases the amount of TRPV1. 9 / 9
| 9
reach
"TNF-alpha increases expression of TRPV1 and TRPV4 mRNA, protein and immunostaining in synoviocytes after 8 hr."
reach
"This long-term up-regulation of TRPV1 expression by TNFalpha correlated with enhancement in capsaicin induced calcitonin gene related peptide release (P < 0.05)."
reach
"It is highly likely that TNF-alpha increases expression of TRPV1 and TRPV4 by mediating the up-regulation directly and/or through initiation of downstream events since the inhibitor reduced the immunostaining increase."
reach
"In addition, TNF increases the TRPV1 protein level and number of TRPV1 expressing neurons."
reach
"TNF is known to increase the expression level of TRPV1 by activating TRPV1 dependent ERK signaling, but the influence of this overexpression on the effect of RTX is still unclear [XREF_BIBR]."
reach
"TNFalpha stimulation of cultured DRG neurons produces an increase in TRPV1 receptor protein level after 1 and 2 h of incubation [XREF_BIBR]."
reach
"In summary, our data demonstrate that TNFalpha directly enhances the sensitivity of rat trigeminal neurons to capsaicin via both rapid, non genomic mechanisms as well as sustained genomic regulation in TRPV1 expression."
reach
"In addition, TNF-alpha was also able to produce subsequent upregulation of TRPV1 protein expression when applied to cultured DRG neurons employing a pathway involving extracellular-signal-related kinase rather than p38 signaling."
reach
"It has been shown previously that TRPV1 receptor expression and sensitivity to capsaicin may be modulated by TNFalpha pretreatment [XREF_BIBR, XREF_BIBR - XREF_BIBR]."
TNF binds TRPV1.
| 5 2
| 5 2
reach
"In fact, TRPV1 shows an increase in expression after prior treatment with TNF-alpha in cultured fibroblast like synoviocytes [XREF_BIBR], suggesting a direct interaction of TNF-alpha and TRPV1."
sparser
"For instance, TRPV1 activity is clearly associated with tumor necrosis factor-α (TNF-α)-induced monoarthritis [ xref , xref ]."
sparser
"Our results demonstrate the importance of the synergistic interaction between TNF-α and TRPV1 in the cochlea and suggest that these are important therapeutic targets for treating NIHL."
reach
"Previous studies suggest interactions between TNF and TRPV1, resulting in a modulation of ion channel function and protein expression in the pathophysiology of inflammatory and neuropathic pain [XREF_BIBR, XREF_BIBR, XREF_BIBR]."
sparser
"In this study, we examine the interactions of TRPV1 and TNF for pain processing after intrathecal administration of RTX by using behavioral tests and detection of protein levels in DRG neurons of rats."
sparser
"Previous studies suggest interactions between TNF and TRPV1, resulting in a modulation of ion channel function and protein expression in the pathophysiology of inflammatory and neuropathic pain [ xref , xref , xref ]."
sparser
"In fact, TRPV1 shows an increase in expression after prior treatment with TNF-α in cultured fibroblast-like synoviocytes [ xref ], suggesting a direct interaction of TNF-α and TRPV1."
TNF affects CD4
| 6 10
TNF decreases the amount of CD4.
| 6
TNF decreases the amount of CD4. 6 / 6
| 6
reach
"This down-regulation of CD4 expression by LPS, TNF-alpha, and IL-1 beta occurs at the level of transcription."
reach
"Actually, TNFalpha down-regulates both surface and total CD4 expression in primary human macrophages at the transcription level [XREF_BIBR, XREF_BIBR - XREF_BIBR]."
reach
"TNF-alpha and IL-1 beta, proinflammatory cytokines which are both induced by LPS, also down-regulate surface and total CD4 expression in TCDM."
reach
"Our results show that LPS, TNF-alpha and IL-1 beta selectively down-regulate CD4 expression in primary human macrophages, and that decreased CD4 expression induced by LPS results from endogenous secretion of TNF-alpha and IL-1 beta by the macrophages."
reach
"TNFalpha, IL-1beta and IFN-gamma down-regulate both surface and total CD4 expression in primary human macrophages at the level of transcription [XREF_BIBR, XREF_BIBR - XREF_BIBR]."
reach
"Although prolonged (1 to 5 days) TNFalpha treatment can downregulate CD4 expression in primary human TCDM, surface CD4 levels were not reduced by 2 h of treatment and was therefore not a limiting step for HIV-1 entry."
TNF binds CD4.
| 6
TNF binds CD4. 6 / 6
| 6
sparser
"Mechanistically, tolerance induction requires the concomitant activation of autoreactive T cells and is associated with the down-regulation of the co-stimulatory TNF-receptor superfamily members OX40 and CD30 sustaining CD4(+) T cell survival."
sparser
"Moreover, we found TNF-α amounts produced from LPS-activated GM-DCs are important for CD4 + T cell polarization, with higher TNF-α amounts being associated with increased FOXP3 + Treg generation from naïve CD4 + T cells."
sparser
"Compared with the individual use of the percentage of single TNF-α–producing CD4 T cells, the combined use of CD4 and CD8 T-cell responses was associated with substantial improvement in the NPV (10% increase), PPV (10% increase), OR (48% increase), and sensitivity (34% increase) but a minor decrease in specificity (7%)."
sparser
"Of note, an almost unique CD4 + T cell population producing TNF and IL-2 was associated with this immunization."
sparser
"A marginally significant association between CS-specific IL-2 secretion and protection from infection has been observed in Mozambiquan infants immunised with RTS,S/AS02 ( xref ), and in the Kenyan (Olotu et al ) and American studies ( xref ) CS-responsive IL-2 + CD4 + T cells and TNF + CD4 + T cells were associated with protection against clinical malaria and malaria infection, respectively."
sparser
"Elsewhere, bifunctional IFN- γ + TNF- α + CD4 + T-cells are significantly associated with active TB compared to the LTBI group [ xref ]."
TNF increases the amount of CD4.
| 4
TNF increases the amount of CD4. 4 / 4
| 4
reach
"Treatment of cultures with recombinant cytokines given at concentrations in the range of those induced by HIV-1 indicated that IL-6 and TNF alpha caused an increase of : i) CD4 expression, ii) HIV absorption to uninfected cells, and iii) release of infectious virions by infected cells."
reach
"We examined the hypothesis that one of the pro inflammatory cytokines, tumour necrosis factor-alpha (TNF-alpha), could induce expression of the adhesion molecule CD4 on human eosinophils."
reach
"We also found that TNF-a could induce and maintain CD4 expression in L4E cells, although this is not the factor produced by SO stroma (32)."
reach
"Conversely, neither LPS nor TNF-alpha and IL-1 beta were able to modulate surface CD4 expression on quiescent or phytohaemagglutinin (PHA)-activated lymphocytes."
THBS1 affects SCARB2
1 | 11 4
THBS1 binds SCARB2.
1 | 4 4
1 | 4 4
sparser
"To demonstrate that TSP-1 peptides interacted only with CD36 fusion proteins containing the TSP-1 binding domain ( xref ), their ability to block 125 I–TSP-1 binding to immobilized CD36 and CD36–GST fusion proteins was tested (Fig. xref B )."
reach
"Because LIMP-2 is predominantly localized on intracellular membrane bound compartments and exhibits only low levels of cell-surface expression (Okazaki et al., 1992; Suarez-Quian, 1987), it is possible that the interaction between LIMP-2 and TSP-1 does not predominate in the physiological setting, particularly given that TSP-1 is found in the matricellular environment."
sparser
"Because LIMP-2 is predominantly localized on intracellular membrane-bound compartments and exhibits only low levels of cell-surface expression (), it is possible that the interaction between LIMP-2 and TSP-1 does not predominate in the physiological setting, particularly given that TSP-1 is found in the matricellular environment."
reach
"60 TSP1 binds to the CD36, LIMP-2, Emp sequence homology domain (AA 93-155) via its TSR, and oxLDL binds to the site (AA 155-183) next to the CD36, LIMP-2, Emp sequence homology domain."
sparser
"To test whether LIMPII also binds TSP1, a LIMPII peptide corresponding to the TSP1 binding domain of CD36 was expressed as a recombinant glutathione S-transferase (GST) fusion protein."
biogrid
No evidence text available
reach
"We recently showed that the corresponding sequence of the CD36 homolog LIMPII bound TSP1 with high affinity, confirming a functionally identical domain."
reach
"To determine the extent of TSP1 contribution to saliva inhibition of HIV infectivity, clarified saliva samples were passed over affinity columns of immobilized TSP binding LIMPII fusion protein LFP75-155 before virus preincubation."
sparser
"In addition, LIMP-2 can bind to TSP1 ( xref ) and TSP2 (not depicted)."
THBS1 activates SCARB2.
| 7
THBS1 activates SCARB2. 7 / 7
| 7
sparser
"Activation of CD36 by TSP-1 phosphorylates p38 and JNK, which results in an increased expression of FasL and apoptosis ( xref ), which we saw in our tumor cells in response to ABT-510."
sparser
"The trimeric TSP1 fragment that activates both CD148 and CD36 may be a powerful tool for anti-angiogenesis therapy."
sparser
"Through its original mechanism of action which supposes concomitant disruption of TSP-1:CD47 interaction and enhancement of CD36 activation by TSP-1, TAX2 may inhibit tumor progression while limiting many of the undesired side effects of broadly inhibiting important physiological functions of CD47."
sparser
"TSP-1 activates CD36, a transmembrane glycoprotein found on macrophages and endothelial cells [ xref , xref ]."
sparser
"Moreover, we show that activation of CD36 by TSP-1 down-modulates the VEGF receptor-2 (VEGFR-2) and p38 mitogen-associated protein kinase phosphorylation induced by VEGF-A165, and this effect was specifically abolished by point mutation at C464."
sparser
"Integrin-associated matricellular protein receptors such as CD47 and CD36 have recently been shown to be involved in pathological ROS production. xref Activation of CD47 and CD36 by thrombospondin-1 (TSP1) inhibits NO signaling xref in VSMCs and may contribute to eNOS uncoupling. xref Additionally, knockout studies of CD36 have implicated CD36 activity in the regulation of Nrf2 nuclear export and degradation, xref which ultimately results in higher levels of oxidative stress due to reduced antioxidant expression."
sparser
"Second, in higher concentrations TSP-1 binds and activates CD36, thereby decreasing intracellular cGMP-levels due to interaction with cellular uptake of myristic acid and decreased eNOS-dependent synthesis of nitric oxide [ xref ]."
TNF affects PTGER4
3 | 1 3 7
TNF increases the amount of PTGER4.
3 | 1 6
TNF increases the amount of PTGER4. 7 / 7
| 1 6
reach
"Specifically, CsA can suppress TNF production without decreasing TNF mRNA, while either dexamethasone or PGE2 block TNF transcription."
reach
"We conclude that (1) IL-1, TNF-alpha, and PTH, but not IL-6 nor IL-11, can increase the expression of PGHS-2, cPLA2, and PGE2 production in cultured mouse calvariae; (2) IL-4 inhibits PGE2 production in both control and stimulated calvarial cultures by inhibiting PGHS-2 and cPLA2; and (3) IL-4 has an inhibitory effect on bone resorption which is independent of PG production."
reach
"Studies have shown that TNF-alpha, along with IFN-gamma, promotes the expression of HGF, PGE2, and COX-2 levels by allogeneic MSCs, contributing to the inhibition of proliferating T lymphocytes [XREF_BIBR]."
isi
"Also, guava significantly enhanced HGEK-16 cell viability (P < 0.05), and IL-beta1, TNFalpha and PGE2 expression presented a 0.6-fold decrease when exposed to guava and LPS (P < 0.05)."
reach
"In the bioactivity assay, PGE2 levels induced by TNFalpha were reduced to an average of 30% using microspheres loaded with 0.1 nmol CXB per transwell; with microspheres loaded with 0.1 nmol TA, PGE2 production was initially reduced to 3% and gradually recovered to 30% reduction."
reach
"Purified human rIL-1 alpha and IL-1 beta increased the levels of both products in the supernatants of the synovial cells; TNF-alpha raised the PGE2 levels but raised the plasminogen activator activity only weakly and inconsistently."
reach
"Taken together, our results suggest that TNFalpha induced a switch from the PGD2 to PGE2 synthesis pathway by regulating PGE2 synthase expression and/or activity and that activators of PKA markedly potentiated the TNFalpha induced increase in PGE2 through up-regulation of COX2 gene expression."
Transcriptionally active TNF increases the amount of PTGER4. 3 / 3
3 |
biopax:ctd
No evidence text available
biopax:ctd
No evidence text available
biopax:ctd
No evidence text available
TNF binds PTGER4.
| 3 1
| 3 1
reach
"Although molecular interactions between TNF-alpha and PGE2 are largely unexplored in human malaria, results presented here show that pfHz induced suppression of PBMC COX-2 gene products induces overproduction of TNF-alpha."
sparser
"As expected, the EP2-R agonist failed to inhibit TNFα-production in EP2-R-deficient cells while the EP4-R agonist did not attenuate TNFα-formation in EP4-R-deficient cells ( Fig. 2 )."
sparser
"The data indicate, that PGE2 can inhibit TNFalpha-formation via both the EP2- and the EP4-receptor and that, however, the EP4-receptor appears to be physiologically more relevant in Kupffer cells since it conferred a high affinity response to PGE2."
sparser
"Exogenous PGE2 inhibited TNFalpha-formation in Kupffer cells lacking either EP2-receptor or EP4-receptor to a similar extent as in control cells, however, 10-fold higher PGE2 concentrations were needed for half maximal inhibition in cells lacking the EP4-receptor than in control or EP2-receptor-deficient cells."
TNF affects THBD
1 | 12
TNF decreases the amount of THBD.
1 | 8
TNF decreases the amount of THBD. 9 / 9
1 | 8
reach
"32 TNF-alpha can down-regulate the expression of thrombomodulin on endothelial cells."
reach
"TNF suppresses transcription of the thrombomodulin gene in endothelial cells and may affect coagulation [XREF_BIBR]."
reach
"Thromobomodulin transgene expression driven by the enhanced PAI-1 promoter in rAAV vector transduced cultured endothelial cells was between 600- and 1000-fold higher than constitutive thrombomodulin gene expression in cultured human umbilical vein endothelial cells and was up-regulated by TGFbeta1 and TNFalpha stimulation which may down-regulate endogenous thrombomodulin gene expression in endothelial cells."
reach
"In the downstream events, TNF-alpha increased TF antigen and activity, and suppressed the expression of thrombomodulin (TM) antigen."
reach
"TNFa and interleukin 1beta induce the expression of endothelial procoagulant activity (tissue factor) and simultaneously downregulate the expression of thrombomodulin, the endothelial surface high-affinity receptor for thrombin, which complexes thrombin to activate the potent anticoagulant protein-C system."
reach
"Tumor necrosis factor (TNF), a mediator of the inflammatory response, induces tissue factor and decreases the expression of thrombomodulin (TM) on endothelial cells, thus shifting the hemostatic properties of the endothelium."
reach
"Suppression of endothelial thrombomodulin expression by TNF-alpha has been documented [XREF_BIBR]."
bel
"TNF alpha and other inflammatory mediators can down-regulate EPCR and TM and IL-6 can depress levels of protein S in experimental animals."
reach
"We conclude that TNF acts primarily to inhibit thrombomodulin transcription."
TNF increases the amount of THBD.
| 4
TNF increases the amount of THBD. 4 / 4
| 4
reach
"In vitro, tumor necrosis factor (TNF) induces endothelial expression of the procoagulant, tissue factor, and downregulation of thrombomodulin, a key component of the thrombomodulin and protein C (PC)/protein S (PS) pathway, which normally maintains an anticoagulant state by inactivating thrombin, preventing further thrombin formation by degrading factors Va and VIIIa, and decreasing plasminogen activator inhibitor activity."
reach
"A major component of this response is a reduction in expression of thrombomodulin, a cell surface cofactor for the activation of protein C. Regulation of thrombomodulin expression by TNF has been reported to occur through multiple mechanisms."
reach
"Suppression of endothelial thrombomodulin expression by TNF-alpha has been documented [XREF_BIBR]."
reach
"TNFalpha and IL-1beta promote thrombosis at the vascular wall by inducing endothelial expression of tissue factor and downregulating expression of thrombomodulin, the endothelial thrombin receptor that plays a key role in the activation of the anticoagulant protein C pathway."
CD4 affects BST2
| 12 1
| 12 1
sparser
"Additionally, we show direct binding of HIV-1 Vpu to CD4 and the recently described restriction factor CD317 (also termed Bst-2 or tetherin), which inhibits retroviral particle release from infected cells xref ."
sparser
"However, Vpu also binds the HIV cell surface receptor CD4 and the restriction factor tetherin, promoting their ubiquitination and degradation by bringing them in close proximity to the SCF β-TrCP E3 ligase complex ( xref , xref )."
sparser
"Beside these interesting changes, the specific determinants for CD4, BST-2 and β-TrcP binding remained highly conserved ( xref ) among all the variants xref – xref , xref – xref ."
sparser
"In recent years it has become evident that Vpu from HIV-1 is interacting with a number of host factors such as CD4, BST-2 and NTB-A (reviewed in )."
sparser
"To further define the viruses’ affinity for CD4 we compared the binding of CD4-IgG 2 to cell surface-expressed envelope trimers by flow cytometry."
sparser
"This protein–protein interaction varies according to the particular viroporin analysed; for instance Viral Protein Unique (Vpu) interacts with CD4 receptor and tetherin (BST2), thereby facilitating the budding of virus particles."
sparser
"Mechanistically, tetherin blocks HIV-1 particle release and, therefore, leads to the formation of aggregated viral particles at the host cell membrane, while Vpu mediates interaction of either CD4 or BST2 to BTRC (βTrCP-1), a substrate recognition subunit of the Skp1/Cullin/F-box E3 ubiquitin ligase, leading to their ubiquitination and subsequent proteasomal degradation [ xref ]."
sparser
"Additionally, considering the importance of the structural configuration of Vpu for targeting both BST2 and its other host protein target CD4, as well as the roles of disordered regions in modulating structural orientation or affording structural plasticity that facilitates interaction with target proteins, we further examined whether these conserved hinge region residues orient Vpu in such a way that binding to BST2 and CD4 is favoured."
sparser
"Given that f-actin formation in isolated human CD4-positive lymphocytes is an important mechanism in cell polarisation during cell migration xref , xref , we next investigated the effect of GLP-1(9-36) on f-actin formation in isolated human CD4-positive lymphocytes using flow cytometry analysis."
reach
"Mechanistically, tetherin blocks HIV-1 particle release and, therefore, leads to the formation of aggregated viral particles at the host cell membrane, while Vpu mediates interaction of either CD4 or BST2 to BTRC (betaTrCP-1), a substrate recognition subunit of the Skp1/Cullin/F-box E3 ubiquitin ligase, leading to their ubiquitination and subsequent proteasomal degradation [XREF_BIBR]."
sparser
"To investigate whether our assay allows to map interacting domains within proteins, we analysed a variety of previously described Vpu mutants xref for their capacity to bind CD4 and CD317 ( xref )."
sparser
"Taken together with the BST2 binding data, the results demonstrate that the E28/L33 residues are essential for optimal binding to both BST2 and CD4."
sparser
"It remains to be elucidated whether the hinge region glutamate residue in VpuC contributes towards binding to BST2 and/or CD4, and whether it is involved as a part of an active trafficking signal."
TNFRSF11A affects TNF
| 10 2
| 9 2
sparser
"Previous studies have reported that increased SOCS3 elevated transforming growth factor-β, TNF-α and RANK ligand (RANKL)-induced osteoclast formation, and promoted precursors to the osteoclast lineage through the inhibition of specific anti-osteoclastic Janus kinase/signal transducer and activator of transcription signals ( xref )."
sparser
"Although these results suggest that TNF-α induces osteoclast differentiation through TNFR1/TNFR2, there were still two possibilities that TNF-α directly binds to RANK or TNF-α increases endogenous production of some factor(s) that can interact with RANK."
sparser
"RANKL is a cytokine of the TNF family, which binds to its receptor RANK as initially documented in osteoclast precursors and dendritic cells [ xref ]."
reach
"Using this approach, we examined the role of six RANK putative tumor necrosis factor receptor associated factor binding motifs (PTM) (PTM1, ILLMT-REE (286-293); PTM2, PSQPS (349-353); PTM3, PFQEP (369-373); PTM4, VYVSQTSQE (537-545); PTM5, PVQEET (559-564); and PTM6, PVQEQG (604-609)) in osteoclast formation and function."
sparser
"It binds RANK ligand [RANK-L/osteoprotegerin ligand (OPGL)/TNF-related activation-induced cytokine (TRANCE)], a TNF superfamily member that acts as a trimer."
sparser
"OPG competes with RANK (receptor activator of nuclear factor κB [NF-κB]) for binding of RANK ligand (RANKL, OPG1) that is also a TNF family member."
reach
"XREF_BIBR, XREF_BIBR In the downstream cascade, transduction factor TNF receptor associated factors (TRAFs), especially TRAF6, can bind to RANK to activate NF-kappaB and the JNK/AP -1 pathway."
sparser
"A functional interaction between RANKL, a member of the tumor necrosis factor (TNF) ligand superfamily and RANK, its cognate TNF-receptor is essential for osteoclast differentiation, survival and activation [ xref ]."
sparser
"On the other hand, the differentiation of precursor cells into osteoclasts depends on the interaction of ODF and RANK (receptor-activator of NFκB), which are members of the TNF and TNF receptor family, respectively."
sparser
"The binding of RANKL to its receptor RANK, a member of the TNF receptor (TNFR) superfamily, recruits and induces the trimerization of adaptor molecules such as TRAF6."
sparser
"Activated T cells can also trigger activation of DC via CD40–CD40L and TNF-related activation-induced cytokine (TRANCE)-TRANCE-R interactions ( Bachmann et al., 1999 ; Josien et al., 1999 ; Wong et al., 1999 ) ( Fig. 2 )."
| 1
sparser
"Osteoclast differentiation requires the interaction of RANK (receptor activator of NF kappaB) and RANK ligand, conserved member of the TNF (tumor necrosis factor) receptor and TNF families, respectively."
TNF affects PLAUR
| 1 11
TNF increases the amount of PLAUR.
| 10
TNF increases the amount of PLAUR. 10 / 10
| 10
reach
"Although tumor necrosis factor alpha (TNF) upregulated monocyte uPAR expression, anti-TNF did not influence the endotoxin induced increase in monocyte uPAR expression."
reach
"TNF-alpha for example is known to play an important role in cerebral malaria and enhances uPAR expression in macrophage like U937 cells, colon carcinoma cell lines, and endothelial cells (Van Hinsbergh et al., 1990; Yoshida et al., 1996)."
reach
"To characterize the signal transduction pathways which regulate the uPAR gene, further experiments are currently in progress to study the signalling pathways and the regulatory sequence (s) and transacting factor (s) that contribute to regulation of uPAR gene expression by PMA, TNFa and amiloride."
reach
"We did not exhaustively explore this possibility, but did examine some likely candidates : VEGF, which signals through VEGF receptors to increase MT1-MMP expression XREF_BIBR; HGF, shown to induce MT1-MMP, MMP2, uPA, and uPAR expression in cancer cells XREF_BIBR, XREF_BIBR; and TNFalpha, which enhances uPAR expression by ECs XREF_BIBR."
reach
"Pro inflammatory cytokines, IFN-gamma) and TNF-alpha (not shown), as well as LPS) enhanced uPAR expression."
reach
"UPAR biosynthesis, the uPAR mRNA level and gene transcription are also increased by transforming growth factor beta (TGFss) and dexamethasone in A549 lung carcinoma cells [12], but reports of transcriptional regulation of uPAR mRNA expression by TNFa in any cell type are * Corresponding author."
reach
"While TNFalpha enhanced uPAR gene expression after 24 hours of treatment (twofold increase), it strongly decreased uPA gene expression (more than 70% reduction) compared with nontreated control conditions."
reach
"To investigate whether induction of uPAR gene expression by TNFa or PMA was dependent on de novo protein synthesis, 139 1 2 3 4 - uPAR - -18 S rRNA- 12 3 4 5 Fig. 1."
reach
"Amiloride (1 mM) also markedly inhibited the uPAR mRNA expression induced by CHX and TNFa."
reach
"Since TNFalpha potently induces uPAR expression in cultured hepatic stellate cells [XREF_BIBR], it is interesting to know how hCLS formation induces TGFbeta activation during the development of NASH and how EPA suppresses the process."
TNF binds PLAUR.
| 1 1
| 1 1
reach
"In contrast, the N-terminal fragment of uPA, which binds to uPAR, but lacks the catalytic site, failed to induce MMP-1 production, indicating that uPA stimulated MMP-1 synthesis was plasmin dependent."
sparser
"Upon the combination of TNF and PGE 2 , the increased transcription of HBEGF and PLAUR associated with chromatin opening in their promoter regions, as detected by ATAC-seq (assay for transposase-accessible chromatin-seq) and FAIRE-qPCR (formaldehyde-assisted isolation of regulatory elements-qPCR) ( xref , xref and xref , respectively, and xref )."
TNF affects IL31RA
| 12
| 12
sparser
"Therefore, even if the GpL domain of GpL-TNF did bind irreversibly to PGRN, a huge surplus of “GpL-free” PGRN would have been available in our experiments to block TNFR1/TNFR2 binding by GpL-TNF (or by GpL-TNF in complex with PGRN)."
sparser
"As expected transfection of plasmids encoding sTNF or memTNF resulted in strong reduction of GpL-TNF binding to TNFR2 (Figures xref A,B)."
sparser
"Neither, PGRN samples from Adipogen and R&D Systems, which has been used in reports demonstrating PGRN–TNF receptor interaction, nor HEK293-derived SNs containing untagged PGRN showed an inhibitory effect on binding of a GpL-TNF fusion protein to plastic-bound or cell-expressed TNFR1/2 (Figures xref and xref ; Figures S1, S2, and S4 in Supplementary Material)."
sparser
"Neither pretreatment with PGRN lys nor with PGRN SN showed a significant inhibitory effect on GpL-TNF binding to TNFR2-Fc (Figures xref B,C)."
sparser
"Next, we analyzed the effect of PGRN on GpL-TNF binding to cells transfected with expression plasmids encoding TNFR1 and TNFR2."
sparser
"Therefore, even if the GpL domain of GpL-TNF did bind irreversibly to PGRN, a huge surplus of “GpL-free” PGRN would have been available in our experiments to block TNFR1/TNFR2 binding by GpL-TNF (or by GpL-TNF in complex with PGRN)."
sparser
"In contrast, lysates and SNs of EV-transfected cells (EV lys and EV SN ) supplemented with 2,000 ng/ml soluble TNF showed efficient inhibition of binding of GpL-TNF (Figures xref B,C)."
sparser
"Preincubation of the TNF receptor transfectants with 50,000, 5,000, and 500 ng/ml of sTNF diminished specific binding of GpL-TNF to both receptors completely, for >99 or >90% (Figure xref B)."
sparser
"To rule out that tags and purification- or storage-related effects compromise the potential ability of PGRN to bind TNF receptors, we directly co-expressed PGRN, and as control TNF, in TNFR1- and TNFR2-expressing cells and looked for binding of GpL-TNF."
sparser
"While expression of TNF strongly inhibited binding of GpL-TNF to TNFR1/2, co-expression of PGRN had not effect on the ability of the TNFR1/2-expressing cells to bind TNF."
sparser
"There was again no evidence for an interference of PGRN with the interaction of GpL-TNF and TNFR2."
sparser
"In a prototypical cell-free competition assay with plastic-bound Fc fusion proteins of the TNFR1 and TNFR2 ectodomains (TNFR1ed-Fc and TNFR2ed-Fc), we obtained no evidence for a significant inhibition of GpL-TNF binding to the two TNF receptors by a >1,000 fold excess of commercially available PGRN samples (Figure xref A)."
TNF affects IL1R1
1 | 4 7
TNF binds IL1R1.
| 4 7
| 2 7
reach
"Here we report that blockade of IL-1alpha and beta and TNFalpha binding to IL-1R and TNFR1, respectively, reduced neuropathology in parietal cortex, hippocampus, and thalamus and improved outcome."
sparser
"Interestingly, while the p80 form of the TNF receptor mRNA levels was elevated by both phorbol ester and dibutyryl cAMP, only dibutyryl cAMP increased the TNF binding; phorbol ester treatment decreased the binding activity."
sparser
"Our study confirms the association of SNPs IL1R1 (rs2234650) and TNFA (rs1800629) with risk of vertical transmission."
reach
"In the case of RIP and IL-1 receptor associated kinase (IRAK), kinases that are part of the TNF- and IL-1R complex, respectively, the essential role suggested for these molecules in TNF and IL-1 signalling could be confirmed in the respective knockout mice (see below)."
reach
"On the other hand, application of IL-1ra or TNF binding protein to diet treated ApoE -/- mice resulted in reduced lesion area."
reach
"These cytokines and their receptors have also been reported to be involved in bone loss after estrogen deficiency : for instance, administration of IL-1Ra and TNF binding protein (TNFbp), an inhibitor of TNF, to ovariectomized mice decreased osteoclastogenesis and bone resorption [XREF_BIBR]."
reach
"The binding of TNF to p60 or p80 receptor was determined by preincubating the cells at 37 C for 1 h with 0.6-0.8 / < g/ml of either preimmune or anti-p60 or anti-p80 antibodies before initiating the 0014-5793/94/S7.00 1994 Federation of European Biochemical Societies."
reach
"XREF_BIBR We have earlier found bivariate associations between trauma and IL-1RA and TNF-alpha in a cross-sectional assessment, XREF_BIBR and we decided to explore these relationships longitudinally."
reach
"IL-1 and TNFalpha bind to the receptors IL-1R and TNFR, respectively, and trigger activation of distinct signaling cascades that converge on TGF-beta activated kinase 1 (TAK1), which phosphorylates and activates IKK, leading to activation of NF-kappaB (XREF_FIG) [XREF_BIBR]."
| 2
sparser
"Then the cells were resuspended in essential medium at a concentration of 5 x lO'/ml and incubated for another 16 h at 37 C. Thereafter specific TNF binding to p60 and p80 was determined as described in section 2."
sparser
"Here we report that blockade of IL-1α/β and TNFα binding to IL-1R and TNFR1, respectively, reduced neuropathology in parietal cortex, hippocampus, and thalamus and improved outcome."
TNF decreases the amount of IL1R1.
1 |
Transcriptionally active TNF decreases the amount of IL1R1. 1 / 1
1 |
biopax:ctd
No evidence text available
TNF affects AQP1
| 11
TNF decreases the amount of AQP1.
| 7
TNF decreases the amount of AQP1. 7 / 7
| 7
reach
"No significant differences in Aqp-1 were found for untreated cells between the 24 hour and 1 week time points, but LPS and TNF-alpha treated cells had significantly reduced Aqp-1 expression at the recovery time point as compared with 24 hour treatment (p < 0.01)."
reach
"The results, depicted in XREF_FIG B, show that TNF-alpha treatment downregulates the expression of both AQP1 and AQP5 (0.183 +/- 0.01 and 0.083 +/- 0.01-fold p < 0.001, respectively), as previously reported [XREF_BIBR]."
reach
"Furthermore, our results show that TNF-alpha treatment downregulates AQP1 expression in endothelial cells, suggesting that SAH induced inflammatory activation might be responsible for the observed SAH mediated decrease of AQP1."
reach
"TNF-alpha Decreases AQP1 and AQP5 Expression in BEAS 2B Cells."
reach
"As seen in XREF_FIG A, AQP1 mRNA expression in HK2 cells was downregulated by a combined TNFalpha plus IL-1beta treatment."
reach
"Suppression of AQP1 transcription by inflammatory TNF-alpha is restrained by KLF2."
reach
"Interestingly, B6-RPE07 cells expressed AQP1 in vitro, and TNF-alpha downregulated AQP1 protein expression in those cells."
TNF increases the amount of AQP1.
| 4
TNF increases the amount of AQP1. 4 / 4
| 4
reach
"However, our data showed that TNF-alpha treatment strongly modulates AQP1 expression in B6-RPE07 cells in vitro."
reach
"Results of AQP1 and AQP5 determination found that HBO and TNF-alpha antagonist would upregulate the expression of AQP1 and AQP5 which was inhibited in rats with ALI."
reach
"We found that TNF-alpha induced a dose dependent down-regulation of AQP1 expression (P < 0.01) at mRNA (XREF_FIG) and protein level (XREF_FIG) and a dramatic decrease in AQP5 gene expression level (about 80% of control) with all the used doses (P < 0.001) (XREF_FIG), paralleled by a comparable trend at protein level (XREF_FIG)."
reach
"Suppression of AQP1 transcription by inflammatory TNF-alpha is restrained by KLF2."
VLDLR affects THBS1
| 4 5
| 3 5
reach
"Recently, it was also shown that thrombospondin-1 binds to Apoer2 and VLDLR in the brain where it participates in the chain migration of postnatal neurons along the rostral stream."
reach
"Thrombospondin-1 binds to ApoER2 and VLDL receptor and functions in postnatal neuronal migration."
sparser
"And the proliferation of microvascular endothelial cells can be inhibited by the interaction of TSP-1 with very low density lipoprotein receptor (VLDLR) ( xref )."
sparser
"The proliferation of HMVECs could be inhibited by the interaction of TSP1 with the very low density lipoprotein receptor (VLDLR)."
sparser
"Using adenovirus-mediated gene transfer experiments, we demonstrate that the very low density lipoprotein receptor can also bind and internalize TSP-1."
reach
"Similarly, we identified Thrombospondin-1 (THBS1), which binds to LRP8 (a.k.a. APOER2) and VLDLR receptors, also receptors for reelin, and seems to play a role in murine postnatal neuronal migration, as well as in synaptogenesis XREF_BIBR, XREF_BIBR."
reach
"In contrast to these antiangiogenic phenomena, TSP-1 may also bind ApoER2 (apolipoprotein E receptor 2) and VLDLR to promote neuronal migration."
reach
"has confirmed the interaction between the VLDLR and TSP-1."
THBS1 binds VLDLR and LRP8. 1 / 1
| 1
sparser
"Recently, it was also shown that thrombospondin-1 binds to Apoer2 and VLDLR in the brain where it participates in the chain migration of postnatal neurons along the rostral stream ( xref )."
TLR4 affects ENO1
| 5 4
| 5 4
sparser
"These well-documented data led us to evaluate the binding of ENO1 to TLR4."
reach
"Further to our present results that show ENO1 binding to TLR4, it would be interesting to study the direct interaction of ENO1 TLR4 and CD14 by surface plasmon resonance technology for better understanding of ENO1 action and to highlight the specific pathways involved."
reach
"This observation suggests that citrullination does not alter ENO1 binding to TLR4 or subsequent inflammatory response, while a loss of function has been reported for other proteins such as MBP-1 in multiple sclerosis XREF_BIBR."
sparser
"In order to compare the binding of ENO1 and LPS to TLR4, we performed a competitive binding assay with ENO1 and FITC-labelled LPS using HEK-Blue hTLR4 cells."
reach
"These well documented data led us to evaluate the binding of ENO1 to TLR4."
sparser
"These results suggest that ENO1 binds TLR4 to induce a pro-inflammatory response."
sparser
"These results suggest that ENO1 binds TLR4 but not in the same manner as LPS."
reach
"These results suggest that ENO1 binds TLR4 to induce a pro inflammatory response."
sparser
"Further to our present results that show ENO1 binding to TLR4, it would be interesting to study the direct interaction of ENO1 TLR4 and CD14 by surface plasmon resonance technology for better understanding of ENO1 action and to highlight the specific pathways involved."
IL1B affects CD44
| 2 7
IL1B increases the amount of CD44.
| 7
IL1B increases the amount of CD44. 7 / 7
| 7
reach
"Therefore, it is very likely that CD44 is related to hyaluronic acid production in human uterine cervix.Our study is the first report that IL-1beta increases the expression of CD44 mRNA in cultured human cervical fibroblasts."
reach
"IL-1beta, at concentrations from 1 to 100 pg/ml, stimulated the expression of CD44 mRNA in a dose dependent manner."
reach
"Expression of CD44 mRNA induced by interleukin-1beta in human cultured uterine cervical fibroblasts."
reach
"Role of activating protein-1 and high mobility group-I (Y) protein in the induction of CD44 gene expression by interleukin-1beta in vascular smooth muscle cells."
reach
"Northern analysis showed that IL-1beta promoted a dose- and time dependent induction of CD44 mRNA which reached 6.6-fold after 48 h, and nuclear run-on analysis showed that IL-1beta increased the rate of CD44 gene transcription within 8 h of stimulation."
reach
"Regulation of CD44 gene expression by the proinflammatory cytokine interleukin-1beta in vascular smooth muscle cells."
reach
"TG2 overexpression in MCF7 cells increased the surface expression of breast cancer stem cell marker CD44, and IL-1beta stimulation of MCF7_TG2 breast cancer cells further increased CD44 expression (Additional file 1 : Figure S3)."
IL1B binds CD44.
| 2
| 2
sparser
"Despite lack of increased expression of CD44, or expression of novel splice variants, we have demonstrated increased binding of exogenous fl-HA by CD44 following stimulation with either IL-1β or 25mM -glucose."
sparser
"Furthermore, blunted crystal phagocytosis was associated with attenuated induction of IL-1β expression and production by CD44 deficient macrophages."
THBS1 affects ITGB3
2 2 4 |
THBS1 binds ITGB3.
2 2 2 |
2 1 2 |
omnipath
No evidence text available
omnipath
No evidence text available
biogrid
No evidence text available
biogrid
No evidence text available
hprd
No evidence text available
1 |
hprd
No evidence text available
THBS1 activates ITGB3.
2 |
THBS1 activates ITGB3. 2 / 2
2 |
omnipath
No evidence text available
omnipath
No evidence text available
TNF affects CXCR4
4 | 3
TNF increases the amount of CXCR4.
4 |
Transcriptionally active TNF increases the amount of CXCR4. 4 / 4
4 |
biopax:ctd
No evidence text available
biopax:ctd
No evidence text available
biopax:ctd
No evidence text available
biopax:ctd
No evidence text available
TNF binds CXCR4.
| 3
| 3
sparser
"At one month of evolution, prehepatic portal hypertensive-rats present increased SDF-1 alpha levels in the hippocampus and cerebellum associated with increased TNF-α and CXCR4 levels in the hippocampus [ xref ]."
sparser
"Mammalian CXCR4 forms with TNFalpha, several HSP proteins and GDF5 an activation cluster involved in monocyte LPS signal transduction [ xref ] and also acts synergistically with the colony-stimulating factor mediated mobilization of hematopoietic stem cells [ xref , xref ]."
sparser
"The resulting MUC1 interacts with activated CXCR4 to downregulate TNFα expression."
TNF affects ABCA1
1 | 6
TNF increases the amount of ABCA1. 6 / 6
| 6
reach
"The expression of ABCA1 was increased by 5 ng/ml or 10 ng/ml TNF-alpha compared with control group, and was inhibited by 20 ng/ml TNF-alpha."
reach
"However, the role for TNF remains controversial since other studies have shown that TNF enhances ABCA-1 expression and the efflux of cholesterol in peritoneal macrophages stimulated with ApoA-I and since evidences from studies performed in murine models are also contentious."
reach
"Interestingly, TNFalpha treatment increased ABCA1 promoter activity and ABCA1 mRNA levels, and increased liver X receptor alpha protein expression, but had no effect on retinoid X receptor alpha and retinoic acid receptor alpha levels."
reach
"Therefore they concluded that TNF-alpha signaled primarily through NF-kappaB to induce ABCA1 expression in macrophages."
reach
"Thus, TNFalpha signals primarily through NF-kappaB to induce ABCA1 expression in macrophages."
reach
"In our study, the induction of ABCA1 expression by TNF-alpha was prevented by pre-treatment of GW9662."
Transcriptionally active TNF increases the amount of ABCA1. 1 / 1
1 |
biopax:ctd
No evidence text available
THBS1 affects LRP8
| 2 5
| 1 5
reach
"In contrast to these antiangiogenic phenomena, TSP-1 may also bind ApoER2 (apolipoprotein E receptor 2) and VLDLR to promote neuronal migration."
reach
"Similarly, we identified Thrombospondin-1 (THBS1), which binds to LRP8 (a.k.a. APOER2) and VLDLR receptors, also receptors for reelin, and seems to play a role in murine postnatal neuronal migration, as well as in synaptogenesis XREF_BIBR, XREF_BIBR."
reach
"Recently, it was also shown that thrombospondin-1 binds to Apoer2 and VLDLR in the brain where it participates in the chain migration of postnatal neurons along the rostral stream."
reach
"Blake et al reported that TSP-1 promoted neural cell migration by binding to ApoER2 in postnatal neuronal migration [XREF_BIBR]."
sparser
"Similarly, we identified Thrombospondin-1 ( THBS1 ), which binds to LRP8 (a."
reach
"Thrombospondin-1 binds to ApoER2 and VLDL receptor and functions in postnatal neuronal migration."
THBS1 binds VLDLR and LRP8. 1 / 1
| 1
sparser
"Recently, it was also shown that thrombospondin-1 binds to Apoer2 and VLDLR in the brain where it participates in the chain migration of postnatal neurons along the rostral stream ( xref )."
ITGB1 affects CD63
1 4 | 1 1
1 4 | 1 1
biogrid
No evidence text available
trips
"Ameloblastin bound to CD63 and promoted CD63 binding to integrin β1."
reach
"For example, TIMP-1 promotes cell survival in erythroleukemic cells after binding with a CD44 and proMMP -9 complex receptor [XREF_BIBR, XREF_BIBR] and in breast and lung epithelial cells after interacting with a CD63 and integrin-beta 1 complex receptor [XREF_BIBR, XREF_BIBR]."
hprd
No evidence text available
hprd
No evidence text available
hprd
No evidence text available
hprd
No evidence text available
IL1B affects CD4
| 3 4
IL1B binds CD4.
| 3 1
| 3 1
sparser
"Factors released from the interaction between IL-1β-competent myeloid cells and CD4 + T cells are highly toxic to neurons."
sparser
"In xref and xref , it seems likely that IL-1β–expressing cells were associated with CD4 + cells, suggesting that the CD4 + cells might be involved, within the wall of the aneurysm, in activating IL-1β production in the dispersed macrophages and that, in turn, these cells might be activating the CD4 + cells, possibly through the presentation of autoantigens."
reach
"For Th17 polarizing conditions, CD4 + T cells were stimulated with plate bound anti-CD3 antibody (0.5 mug/ml) and anti-CD28 antibody (1 mug/ml) (BD Pharmingen), anti-IFN-gamma (2 mug/ml), anti-IL-4 (2 mug/ml), IL-1beta (20 ng/ml), and IL-6 (20 ng/ml) (R&D systems) for 72 h. Fn14-Fc was purchased from R&D systems."
sparser
"Therefore, mPGES-1 stimulates an intercellular interaction between CD4 + T cells by upregulating the autocrine function of IL-1β in activated CD4 + T cells, which release IL-17 to facilitate axonal and myelin damage in EAE mice."
IL1B increases the amount of CD4.
| 3
IL1B increases the amount of CD4. 3 / 3
| 3
reach
"This down-regulation of CD4 expression by LPS, TNF-alpha, and IL-1 beta occurs at the level of transcription."
reach
"Conversely, neither LPS nor TNF-alpha and IL-1 beta were able to modulate surface CD4 expression on quiescent or phytohaemagglutinin (PHA)-activated lymphocytes."
reach
"However, after 24h, IL-1beta significantly increased surface expression of the positive CD4 + T-cell co-stimulatory molecule, ICOS-L 57."
CXCR4 affects CD63
| 4 3
| 4 3
sparser
"These findings suggest that CD63 interacts with CXCR4 through the N-linked glycans-portion of the CD63 protein and that the complex induces direction of CXCR4 trafficking to the endosomes/lysosomes, rather than to the plasma membrane."
reach
"Either CD63 or CD63DeltaN formed a complex with CXCR4 at the Golgi apparatus and the late endosomes, while CD63 GD mutants lost the ability to form a complex with CXCR4 exclusively at the Golgi apparatus."
sparser
"Indeed, Yoshida et al. showed that CD63 had three N-linked glycosylation sites [ xref ], that CD63 interacts with CXCR4 through the N-linked glycans-portion of the CD63 protein and that the complex induces the direction of CXCR4 trafficking to the endosomes/lysosomes, rather than to the plasma membrane."
sparser
"In the present study, it was found that CD63 and its mutant efficiently interact with CXCR4 in live cells and that CD63-induced downregulation and interaction are significantly abrogated by the N-linked glycosylation inhibitor, TM."
reach
"Indeed, Yoshida et al. showed that CD63 had three N linked glycosylation sites [XREF_BIBR], that CD63 interacts with CXCR4 through the N linked glycans-portion of the CD63 protein and that the complex induces the direction of CXCR4 trafficking to the endosomes and lysosomes, rather than to the plasma membrane."
sparser
"Either CD63 or CD63DeltaN formed a complex with CXCR4 at the Golgi apparatus and the late endosomes, while CD63 GD mutants lost the ability to form a complex with CXCR4 exclusively at the Golgi apparatus."
reach
"These findings suggest that CD63 interacts with CXCR4 through the N linked glycans-portion of the CD63 protein and that the complex induces direction of CXCR4 trafficking to the endosomes and lysosomes, rather than to the plasma membrane."
TNF affects IL6ST
| 1 5
TNF increases the amount of IL6ST.
| 4
TNF increases the amount of IL6ST. 4 / 4
| 4
reach
"Enhancement of IL-6 receptor beta chain (gp130) expression by IL-6, IL-1 and TNF in human epithelial cells."
reach
"On the other hand, both TNF-alpha and LPS upregulate gp130 surface expression and its release from vascular endothelial cells."
reach
"Moreover, we found that TNF-alpha and IL-6 secreted by activated Kupffer cells dramatically increased TNFR1 and GP130 expression in hepatocytes compared to untreated control cells."
reach
"In RASFs, the expression of gp130 subunit was significantly upregulated by TNFalpha while the IL12Rbeta2 receptor subunit was expressed neither constitutively nor induced by TNFalpha."
TNF binds IL6ST.
| 1 1
| 1 1
sparser
"There were no significant associations between cord blood IL-6, TNF and gp130 and polymorphisms of the encoding genes."
reach
"Additionally, challenging hepatocyte specific gp130 knockout animals with lipopolysaccharides (LPS) lead to an onset of acute liver injury with an increase of hepatocyte apoptosis associated with elevated tumor necrosis factor alpha (TNF-alpha) serum levels and reduced nuclear factor kappaB (NF-kappaB) activation in hepatocytes."
TNF affects CD44
| 1 4 1
| 1 4 1
sparser
"Recent clinical work using TNF-alpha inhibitors for the treatment of ovarian cancer makes the study of TNF-alpha interactions with CD44 crucial to determining treatment a success or a failure."
sparser
"A positive correlation was also obtained between TNF-α and CD44 expression, and co-upregulation of TNF-α and CD44 was associated with primary tumor stage, distant metastasis, and poor prognosis."
trips
"Tumor necrosis factor-inducible gene 6 interacts with CD44, which is involved in fate-change of hepatic stellate cells."
reach
"Tumor necrosis factor inducible gene 6 interacts with CD44, which is involved in fate-change of hepatic stellate cells."
sparser
"Ifn -γ which is also upregulated in B6 but notCcr2 −/− mice has also been shown to enhance TNF-α mediated binding of CD44 to HA xref ."
sparser
"Real-time PCR analysis showed that the treated A549 cells highly over expressed TNF-α, which was associated with a significant reduction of CD44 gene expression levels (p  <  0.05)."
TNF affects ANTXR1
| 6
| 6
sparser
"It was previously shown xref that freshly isolated murine peritoneal macrophages underwent apoptosis upon HSV-2 infection, which was associated with the up-regulation of Fas and TNF-receptor 1 (TNF-R1) pathways."
sparser
"One study showed that TNF binds to TNF receptor 1 (TNFR1) and riboflavin kinase (RFK) to activate NOX1 leading to cell death [ xref ]."
sparser
"Upon tumor necrosis factor α (TNF-α) stimulation, MOAP-1 associates with the TNF receptor 1, subsequently, RASSF1A was recruited to this complex and then participates in the death receptor-dependent apoptosis[ xref ]."
sparser
"TNF binds to the extracellular domains of TNF receptor 1 (TNFR1) and collects TNFR1-associated death domain protein (TRADD) to the cytoplasm death domain of the TNFR1."
sparser
"Upon TNF stimulation, TNF receptor 1 binds TRADD, which in turn recruits TRAF2, cIAP1 and cIAP2, and subsequently the linear ubiquitin assembly complex (LUBAC) [ xref ]."
sparser
"This is surprising as another study showed OUA to block the activation of the TNF/NF-κB pathway by interfering with the interaction between TNF receptor 1 and TRADD in HeLa cell cultures [ xref ]."
TNF affects AGTR1
2 | 4
TNF binds AGTR1.
| 4
| 4
sparser
"The aim of the present study was to examine plasma AT1-AA titer in severe preeclampsia and determine whether change in AT1-AA level was associated with TNF-α and VEGF."
sparser
"Moreover, TNF- α –induced hypertension (97±2 to 112±2 mm Hg; P <0.05) in pregnant rats was associated with AT1-AA production (TNF- α rats 9.2±2.3 U versus NP rats 1.0±0.8 U; P <0.05)."
sparser
"We have recently reported that the hypertension in response to placental ischemia is associated with increases in plasma levels of sFlt-1, sEng, TNF-α, and AT1-AA. xref , xref We also demonstrated that chronic infusion of TNF-α or AT1-AA, at rates to mimic the increase of these factors observed in placental ischemic pregnant rats, significantly contributes to elevated blood pressures. xref – xref Moreover, we found that chronic infusion of TNF-α in pregnant rats stimulated the production of AT1-AA and the blood pressure response to TNF-α or AT1-AA were attenuated by treatment with an angiotensin type 1 receptor antagonist. xref , xref Although these findings suggest an important interaction between TNF-α and AT1-AA in the blood pressure response to placental ischemia, it is unknown whether these factors interact in regulating sFlt-1 and sEng production."
sparser
"Moreover, TNF-alpha-induced hypertension (97+/-2 to 112+/-2 mm Hg; P<0.05) in pregnant rats was associated with AT1-AA production (TNF-alpha rats 9.2+/-2.3 U versus NP rats 1.0+/-0.8 U; P<0.05)."
TNF increases the amount of AGTR1.
2 |
Transcriptionally active TNF increases the amount of AGTR1. 2 / 2
2 |
biopax:ctd
No evidence text available
biopax:ctd
No evidence text available
TNF affects NOTCH1
| 4 1
| 4 1
sparser
"By linking Notch and TNFα it was shown that (1) Notch-1 mucosal expression differs in inflamed and non-inflamed mucosa and increases in response to anti-TNFα treatment; (2) Notch-1 function is regulated by TNFα inhibitors; (3) Notch-1 binds to TNFα; and (4) Notch-1 inhibition prevents anti-TNFα-induced T cell cycle arrest but not apoptosis."
sparser
"In parallel with our findings, Daniel et al. [43] reported that TNF-α inhibited Mfn2 expression in cells and that Notch1 could directly bind to TNF-α [44] , supporting positive regulation of Mfn2 by Notch1 via TNF-α inhibition."
sparser
"TNF promoted p52/RELB binding to NICD, which enhanced binding at the RBPjκ site within the Hes1 promoter."
reach
"By linking Notch and TNFalpha it was shown that (1) Notch-1 mucosal expression differs in inflamed and non inflamed mucosa and increases in response to anti-TNFalpha treatment; (2) Notch-1 function is regulated by TNFalpha inhibitors; (3) Notch-1 binds to TNFalpha; and (4) Notch-1 inhibition prevents anti-TNFalpha-induced T cell cycle arrest but not apoptosis."
sparser
"The upregulation of constitutive nuclear factor NF-κB, as well as CD30, CD40, tumor necrosis factor (TNF)-α, and Notch1 interactions contributes to these processes ( xref )."
TNF affects NGFR
| 5
| 5
sparser
"Thus, NgR1 forms a complex with Leucine rich repeat and Ig domain containing 1 (LINGO-1) and tumor necrosis factor family member (TROY) and/or low affinity nerve growth factor receptor (p75)."
sparser
"The only exception is NGFR, which binds non‐TNF‐like ligands and signals as a dimer ( Locksley et al. , 2001 )."
sparser
"4-lBB and OX-40 are members of tumor necrosis factor (TNF)-nerve growth factor receptor subfamily that bind TNF receptor-associated factors and activate nuclear factor lCB. ~o!."
sparser
"This is an intriguing possibility in light of the apparent interaction between TNF and p75NTR, since TACE and MMPs are involved in proteolytic cleavage-related modulation of signaling in both systems [ xref , xref , xref ]."
sparser
"Among the envelope glycoproteins, gD is a potential candidate because it has been shown to interact with a member of the tumor necrosis factornerve growth factor receptor family [53,54] ."
THBS1 affects ITGB1
1 4 |
THBS1 binds ITGB1.
1 2 |
1 2 |
hprd
No evidence text available
omnipath
No evidence text available
omnipath
No evidence text available
THBS1 activates ITGB1.
2 |
THBS1 activates ITGB1. 2 / 2
2 |
omnipath
No evidence text available
omnipath
No evidence text available
PTGER3 affects IL1B
| 5
| 5
sparser
"Clinically, high-gingival crevicular fluid levels of PGE-2, IL-1β, or IL-6 have been associated with their elevated levels in amniotic fluid.[ xref ] The inflammatory response appears to be the privileged pathway of the pathogenic periodontal disease influence on pregnancy, as suggested for other major systemic diseases, including cardiovascular diseases or diabetes.[ xref ]"
sparser
"Higher levels of GCF IL-1beta and PGE(2) were significantly associated with clinical signs of periodontal disease and independently related to patient-based anthropomorphic measures, behaviours and exposures in community-dwelling adults."
sparser
"Increased levels of IL-1beta and PGE(2) were associated with body mass index >or=30 kg/m(2)."
sparser
"IL-6 did increase IL-1beta-induced PGE(2) formation in unstimulated cells but not in cells stimulated with arachidonic acid (AA; 10(-5) M), suggesting that IL-6 effects were mediated at the level of AA release."
sparser
"The close parallel between the kinetics of COX-2 expression and PGE synthesis indicated that IL-1β-induced PGE formation in TSMCs is mediated through the enhanced expression of COX-2."
IL1B affects TRPC3
| 1 4
IL1B increases the amount of TRPC3.
| 4
IL1B increases the amount of TRPC3. 4 / 4
| 4
reach
"Interleukin-1beta specifically upregulated TRPC3 protein expression in myometrial cells without influencing TRPC3 mRNA and had no effect of TRPC4 mRNA or protein [XREF_BIBR]."
reach
"IL-1 beta did not alter TrpC1, 3, 4, 6, or 7 mRNA expression; but IL-1 beta exclusively up-regulated TrpC3 protein expression (P < or = 0.05)."
reach
"Specifically, IL1B modulates protein expression of TRPC3 (a putative calcium channel) and SR Ca 2+ -ATPases, initiates spontaneous [Ca 2+] i oscillations and augments calcium influx pathways and a store operated current [XREF_BIBR, XREF_BIBR]."
reach
"The induction of TRPC3 protein expression by IL1B may in part explain the increase in TRPC3 expression observed in uterine muscle at labour onset and provides a plausible mechanism by which cytokines could induce premature labour."
IL1B binds TRPC3.
| 1
TNF binds TRPC3 and IL1B. 1 / 1
| 1
sparser
"An increased TRPC3 expression was significantly associated with increased expression IL-1β or TNF-α."
IL1B affects ANTXR1
| 5
| 5
sparser
"IL-1α and IL-1β bind to the IL-1 receptor 1 (IL-1R1) [ xref , xref ]."
sparser
"IL-1α and IL-1β both bind to the IL-1 receptor 1 (IL-1RI), which is present on almost all cell types, including structural cells such as airway epithelial cells [ xref , xref ]."
sparser
"Both IL-1α and IL-1β bind to IL-1 receptor 1 (IL-1R1)."
sparser
"IL-1 signaling is activated when either of the agonistic IL-1 ligands i.e. IL-1α or IL-1β binds to the IL-1 receptor 1 (IL-1R1) which then forms a complex with the IL-1 receptor accessory protein (IL-1RAcP)."
sparser
"Both IL-1α and IL-1β interact with the IL-1 receptor 1 (IL-1R1) and recruit the IL-1 receptor accessory protein (IL-1R3, formerly IL-1RAcP) to induce a downstream signal via several inflammatory kinases, such as Myd88, ERK, JNK and NFκB, leading to transcription of inflammatory, catabolic genes [ xref - xref ]."
TNF affects IFNGR1
3 | 1
TNF increases the amount of IFNGR1.
3 |
Transcriptionally active TNF increases the amount of IFNGR1. 3 / 3
3 |
biopax:ctd
No evidence text available
biopax:ctd
No evidence text available
biopax:ctd
No evidence text available
TNF binds IFNGR1.
| 1
| 1
reach
"Candidate gene studies indicated associations between polymorphic alleles of SLC11A1 (formerly called NRAMP1), IL4, IFNGR1, and TNFA (encoding TNF-alpha) and development of visceral leishmaniasis, asymptomatic infection, or PKDL [XREF_BIBR - XREF_BIBR]."
THBS1 affects CD44
| 3 1
| 3 1
sparser
"TSP-1 interacts with CD44 ligands or HA binding proteins to influence CD44 expression [ xref ]."
sparser
"These studies indicate a clear connection between the two molecules, and since both CD44 and TSP-1 bind multiple ligands there is a distinct possibility that one or more of these ligands could bridge TSP-1 with CD44, thus, facilitating the DBP binding site complex."
reach
"However, there are indirect associations between CD44 and TSP-1 that may be relevant to understanding how TSP-1 assists DBP in enhancing chemotaxis to C5a."
sparser
"We believe that TSP-1 bridges cell surface receptors and facilitates (i.e., accelerates) formation of the DBP binding site complex, but there is no evidence that TSP-1 directly interacts with either CD44 or annexin A2, two molecules that we have previously shown are part of the DBP binding site ( xref )."
M6PR affects CTSD
| 4
| 3
sparser
"Both treatments resulted in suppression of cellular proliferation and the induction of a cell death with no detectable caspase-3 activation or DNA fragmentation, however, it was associated with increased accumulation of cathepsin D, cellular vaculolization, expression of the mannose-6-phosphate receptor, and the autophagy marker LC3-II, all of which are believed to be associated with autophagy."
sparser
"In the latter study, the authors demonstrated an interaction between M6PR and pCathD."
sparser
"Cathepsin D binds to the monocyte/macrophage mannose-6-phosphate receptor [44,45,69], which determines the sorting of cathepsin D between intracellular and plasma membrane components."
SORT1 binds CTSD and M6PR. 1 / 1
| 1
sparser
"Cathepsin H has previously been demonstrated to interact with sortilin, while cathepsin D interacts with both sortilin and the M6PR."
KCNH2 affects CALR
1 | 2 1
1 | 2 1
reach
"To assess the physical interaction between hERG and Calnexin and Calreticulin, immunoprecipitation was done with anti-Calnexin or anti-Calreticulin antibody, followed by Western blot analysis with anti-hERG antibody."
biogrid
No evidence text available
sparser
"As shown in xref , treatment with lactacystin or ALLN but not leupeptin (a lysosome inhibitor) results in an increase in the levels of core-glycosylated, immature form of hERG, Calnexin and Calreticulin."
sparser
"Furthermore, the interaction between mutant hERG proteins and chaperone proteins, Calnexin and Calreticulin, play crucial roles in these processes."
ITGAV affects CALR
1 3 |
1 3 |
omnipath
No evidence text available
omnipath
No evidence text available
omnipath
No evidence text available
hprd
No evidence text available
IL1B affects TRPV4
4 |
Transcriptionally active IL1B increases the amount of TRPV4. 4 / 4
4 |
biopax:ctd
No evidence text available
biopax:ctd
No evidence text available
biopax:ctd
No evidence text available
biopax:ctd
No evidence text available
IL1B affects PDGFRA
| 2 2
IL1B phosphorylates PDGFRA.
| 2
IL1B phosphorylates PDGFRA. 2 / 2
| 2
sparser
"IL-1beta-stimulated c-Src, PDGFR, and Akt phosphorylation and proMMP-9 expression were attenuated by the inhibitors of c-Src (PP1), PDGFR (AG1296), and PI3K (LY294002), respectively, or transfection with dominant negative plasmid of c-Src or short hairpin RNAs of PDGFR and Akt."
sparser
"Src, PDGFR, and PI3K/Akt mediated the effects of IL-1beta because pretreatment with PP1, AG1296, and wortmannin also abrogated IL-1beta-stimulated Src, PDGFR, and Akt phosphorylation, respectively."
IL1B increases the amount of PDGFRA.
| 2
IL1B increases the amount of PDGFRA. 2 / 2
| 2
reach
"Collectively, these findings support the notion that C/EBPdelta mediated increase in PDGFR-alpha expression by IL-1beta is involved in smooth muscle cell hyperplasia by partial deletion of XBP1."
reach
"Active CREB prevents activation of PDGFRalpha promoter-luciferase reporter activity by CCAAT and enhancer binding protein-delta (C/EBPdelta), shown to mediate IL-1beta stimulation of PDGFRalpha expression."
IL1B affects HRH1
| 4
IL1B binds HRH1.
| 2
| 2
sparser
"The same signalling pathway is involved in the interactions between histamine, interleukin-1beta, and interleukin-6, where NGF secretion is amplified."
sparser
"In this review, the biochemical mechanisms of histamine-stimulated NGF synthesis and secretion, and interactions between histamine, interleukin-1beta, and interleukin-6 are discussed."
IL1B activates HRH1.
| 2
IL1B activates HRH1. 2 / 2
| 2
sparser
"Moreover, an experimental study of central administration of interleukin-1β in rats demonstrated that interleukin-1β may stimulate synthesis and release of hypothalamic histamine at presynaptic terminals by activation of histidine decarboxylase (a histamine-synthesizing enzyme) and thus facilitate the degradation of extracellular histamine by the activation of histamine-N-methyltransferase (a degrading enzyme). xref These results indicate that interleukin-1β activates neural histamine turnover in the hypothalamus."
sparser
"Moreover, interleukin-1beta may activate the turnover of hypothalamic neural histamine."
IL1B affects CNR1
| 4
IL1B increases the amount of CNR1. 4 / 4
| 4
reach
"Next, we examined a possibility that the male specific upregulation of CB1 expression by IL-1beta can be mediated by the differential expression of AR in TG between the two sexes."
reach
"Interleukin-1 beta (IL-1beta), a proinflammatory cytokine, upregulated CB1 mRNA expression in TG of male rats."
reach
"In this study, however, we demonstrated that the IL-1beta induction of CB1 expression was prevented only in the presence of flutamide, but not ICI 182,780."
reach
"In this study, we confirmed that IL-1beta application reliably and significantly increases CB1 expression in TG primary cultures prepared from intact male rats (XREF_FIG)."
IL1B affects ABCA1
4 |
Transcriptionally active IL1B decreases the amount of ABCA1. 4 / 4
4 |
biopax:ctd
No evidence text available
biopax:ctd
No evidence text available
biopax:ctd
No evidence text available
biopax:ctd
No evidence text available
IGF2R affects CTSD
1 | 2 1
1 | 2 1
hprd
No evidence text available
reach
"As shown in XREF_SUPPLEMENTARY, 86% of the Ctsk activity and 16% of the Ctsd activity from WT lysates bound the CI-MPR column."
sparser
"Newly synthesized CTSD binds CI-M6PR in the TGN and is subsequently translocated into endosomes (Figure xref )."
sparser
"Interestingly, when analyzing the cathepsins' interaction with the CI-MPR, the authors observed that, unlike cathepsin H, which bound exclusively to sortilin, cathepsin D was also able to bind to the CI-MPR."
ENO1 affects CD47
| 2 2
| 2 2
sparser
"The interaction between CD47 and ENO1 was verified by co-immunoprecipitation (co-IP)."
sparser
"Our mechanistic investigations demonstrated that CD47 interacted with ENO1 and protected it from ubiquitin-mediated degradation, subsequently promoting glycolytic activity and phosphorylation of ERK in CRC cells."
reach
"Our mechanistic investigations demonstrated that CD47 interacted with ENO1 and protected it from ubiquitin mediated degradation, subsequently promoting glycolytic activity and phosphorylation of ERK in CRC cells."
reach
"The interaction between CD47 and ENO1 was verified by co-immunoprecipitation (co-IP)."
CD47 affects CALR
| 3 1
| 2 1
sparser
"Abnormalities in the PI3K/Akt signaling pathway deregulation of C/EBP-α and its partner PPAR-γ , and the interaction between calreticulin (CRT) and CD47 are also promising therapeutic targets."
sparser
"In DMM, calreticulin expression was not statistically associated with CD47 expression levels ( xref )."
reach
"Abnormalities in the PI3K and Akt signaling pathway deregulation of C/EBP-alpha and its partner PPAR-gamma, and the interaction between calreticulin (CRT) and CD47 are also promising therapeutic targets."
THBS1 binds CALR and CD47. 1 / 1
| 1
sparser
"These results unveil an autocrine mechanism of calreticulin-thrombospondin-1-CD47 interaction for the control of T cell motility and migration within three-dimensional extracellular matrix substrata."
TNF affects LRP1
| 3
| 3
sparser
"Among these factors, only LRP, P-gp and TNF-α were associated with response to platinum-based chemotherapy."
sparser
"Moreover, Scuderi et al. [ xref ] and Andrade et al. [ xref ] showed that TNFα and IFNα may be associated with persistent LRP."
sparser
"TNFα and IL1β are associated with the initiation of the APR after influenza infection, acting in the brain regions responsible for regulation of temperature, sleep, food intake and sickness behavior ( xref ; xref )."
TNF affects KCNN1
| 3
TNF activates KCNN1. 3 / 3
| 3
sparser
"TNFα activated Sk1 and induced its translocation to the smooth muscle cell membrane."
sparser
"As shown in Figure 2 , TNFα activates SK-1 in a biphasic pattern with significant increases observed at 10 minutes and 4 to 6 hours after TNFα treatment."
sparser
"First, TNFα-induced activation of SK-1 in ECs was confirmed using an enzymatic assay."
TNF affects CNR1
3 |
Transcriptionally active TNF increases the amount of CNR1. 3 / 3
3 |
biopax:ctd
No evidence text available
biopax:ctd
No evidence text available
biopax:ctd
No evidence text available
TNF affects AXL
| 1 2
TNF increases the amount of AXL.
| 2
TNF increases the amount of AXL. 2 / 2
| 2
reach
"TNF and IFN-alpha also elevated Axl expression (XREF_FIG)."
reach
"Since it had been reported that Axl regulates TNFalpha transcription through induction of TWIST, we analyzed TWIST expression but found no difference in the amount of TWIST RNA between naive and EAE induced Axl-/- and WT mice (data not shown)."
TNF binds AXL.
| 1
TNF binds AXL. 1 / 1
| 1
sparser
"Increased formation of AXL-NTF triggers subsequent intracellular cleavage."
THBS1 affects SDC4
| 1 2
| 1 2
reach
"There are indications that binding of TSP-1 to syndecan-4 proteoglycan mediates tubulogenesis and their protection from apoptosis [XREF_BIBR]."
sparser
"There are indications that binding of TSP-1 to syndecan-4 proteoglycan mediates tubulogenesis and their protection from apoptosis [ xref ]."
reach
"However, by binding to syndecan-4, TSP-1 can also exert pro angiogenic effects, protecting ECs from apoptosis and stimulating tubulogenesis [XREF_BIBR]."
THBS1 affects CD4
| 1 2
| 1 2
reach
"Given the lack of empirical data and the complexity of the signaling processes, we set out here to interrogate potential mechanisms for the inhibition of VEGF and VEGFR2 signaling to ERK1/2 and calcium by TSP1 and CD4 interaction utilizing a detailed rule based model of VEGF signaling to ERK1/2 and calcium incorporating VEGFR2, the co-receptor NRP1, and the detailed dynamics of the receptors."
reach
"Additionally, TSP-1 binds CD4 to block HIV entry into target cells."
sparser
"Additionally, TSP-1 binds CD4 to block HIV entry into target cells ( xref )."
SORT1 affects CTSD
| 1 2
| 2
reach
"In mammals, cathepsin D (aspartyl protease), prosaposin C and acid sphingomyelinase can also interact with their receptor sortilin via stretches of amino acids."
reach
"Cathepsin H has previously been demonstrated to interact with sortilin, while cathepsin D interacts with both sortilin and the M6PR."
SORT1 binds CTSD and M6PR. 1 / 1
| 1
sparser
"Cathepsin H has previously been demonstrated to interact with sortilin, while cathepsin D interacts with both sortilin and the M6PR."
PLAUR affects ENO1
| 2 1
| 2 1
sparser
"To directly examine the ability of these molecules to interact, we performed a cell-free dot blotting assay and found that ENO1, uPA, and uPAR interact with each other, while plasminogen only interacts with ENO1 ( xref )."
sparser
"ENO1 was able to interact with uPA, and uPAR; resulting in augmentation of cell migration and invasion."
reach
"In this study, we demonstrated that surface ENO1 interacted with plasminogen, uPA and uPAR on the PE089 and LLC and luc lung cancer cell lines."
KIT affects CD63
2 | 1
2 | 1
biogrid
No evidence text available
sparser
"Rather, the kinetics of SCF binding to c-Kit were altered when c-Kit associated with CD63."
biogrid
No evidence text available
IL1B affects ITGB8
| 3
IL1B increases the amount of ITGB8. 3 / 3
| 3
reach
"Here we report the mechanism of increased ITGB8 expression by IL-1beta."
reach
"IL-1beta activates Itgb8 expression by chromatin remodeling and exposure of binding sites for additional transcription factors, and the expression of Itgb8 in different cell types corresponds with the chromatin state of the Itgb8 core promoter."
reach
"We have previously shown that the proinflammatory cytokine interleukin-1beta (IL-1beta) increases ITGB8 expression on lung fibroblasts, which increases alphavbeta8 mediated TGF-beta activation in fibrosis and pathologic inflammation."
IL1B affects IFNGR1
3 |
Transcriptionally active IL1B increases the amount of IFNGR1. 3 / 3
3 |
biopax:ctd
No evidence text available
biopax:ctd
No evidence text available
biopax:ctd
No evidence text available
VDAC2 affects RPN1
2 |
2 |
biogrid
No evidence text available
biogrid
No evidence text available
VDAC1 affects RPN1
2 |
2 |
biogrid
No evidence text available
biogrid
No evidence text available
TRPM7 affects TNF
| 2
| 2
sparser
"Our results further showed that TNFα did not directly interact with TRPM7, indicating that TNFα was not a direct activator of TRPM7 channel."
sparser
"Furthermore, co-immunoprecipitation assay showed that TNFα did not directly interact with TRPM7 in SNU739 and HLF cells (Additional file xref : Figure S1i)."
TRPA1 affects IL1B
| 1 1
| 1 1
reach
"In addition to the mechanisms described above, a more direct interaction between TRPA1 and IL-1beta in MSU crystal induced inflammation is possible, as TRPA1 activation has been reported to enhance IL-1beta production in keratinocytes [XREF_BIBR], and a similar effect was found in the present study in the air-pouch model."
sparser
"In addition to the mechanisms described above, a more direct interaction between TRPA1 and IL-1β in MSU crystal-induced inflammation is possible, as TRPA1 activation has been reported to enhance IL-1β production in keratinocytes [ xref ], and a similar effect was found in the present study in the air-pouch model."
TNFRSF1A affects IL1RN
| 2
sparser
"Several investigators also found increases in sTNFR1 in the serum of SZ patients. xref reported association of TNFR1 and IL-1RA with general severity of psychotic symptoms in SZ."
sparser
"Hope et al. (2013) reported association of TNFR1 and IL-1RA with general severity of psychotic symptoms in SZ."
TNF affects SORT1
| 1 1
| 1 1
sparser
"Here, we report that in addition to trophic factor production, muscle produces proBDNF that may promote MN death via interaction with the p75 NTF receptor and sortilin."
reach
"Using coimmunoprecipitation and surface plasmon resonance (SPR) we replicated the interaction between PGRN and sortilin and that between TNF and TNFRI/II, but not the interaction between PGRN and TNFRs."
TNF affects ROBO1
| 2
| 2
reach
"Slit processing generates an N-terminal fragment (SlitN) that binds to Robo1 and Robo2 receptors and mediates Slit repulsive activity, as well as a C-terminal fragment (SlitC) with an unknown receptor and bioactivity."
reach
"Its N-terminal fragment (approximately 120kDa), termed Slit2N, can bind to Robo1 to inhibit gp120 and co-receptor-induced cytoskeletal rearrangements associated with LIMK- and cofilin regulated actin polymerization in activated and resting CD4 + T cells."
TNF affects RHO
| 2
TNF activates RHO. 2 / 2
| 2
sparser
"It is established that TNFα can activate Rho family GTPases, including Rac/Cdc42 [ xref – xref ] and RhoA [ xref ]."
sparser
"TNF- α -induced activation of Rho family GTPases has also been reported in diverse cellular contexts ( xref - xref ), but the molecular events underlying and regulating the activation process remain poorly understood."
TNF affects PTPN6
| 2
| 2
sparser
"In endothelial cells, SHP-1 is physically associated with VEGFR2 and is also required for both TNFα-mediated and tissue-inhibitor of metalloproteinases (TIMP)-mediated inhibition of angiogenesis xref ."
sparser
"SHP-1 is also associated with the inhibition of endothelial cell proliferation mediated by TNF-alpha and the reduction in angiogenesis by the inactivation of KDR/flk-1 [ xref ]."
TNF affects PLXNA3
| 2
TNF activates PLXNA3. 2 / 2
| 2
sparser
"TNFα alone does not strongly activate J-Lat 6.3, 8.4 and 9.2 cells, as shown in Fig. xref , and as reported [ xref ]."
sparser
"Although there were differences in the extent of activation that depended on the order of addition, Aza-CdR always enhanced activation of J-Lat 6.3 by TNFα, with FI-Aza ranging between 3.8 and 1.9."
TNF affects PLXNA2
2 |
2 |
biogrid
No evidence text available
biogrid
No evidence text available
TNF affects NRP1
2 |
2 |
biogrid
No evidence text available
biogrid
No evidence text available
TNF affects NEO1
2 |
2 |
biogrid
No evidence text available
biogrid
No evidence text available
TNF affects KCNH1
| 2
TNF inhibits KCNH1. 2 / 2
| 2
sparser
"Analysis of several satellite cell regulators revealed that TNFα is capable of inhibiting Notch-1 in satellite cells and C2C12 myoblasts, which was also found to be dependent on NF-κB. Notch-1 inhibition occurred at the mRNA level suggesting a transcriptional repression mechanism."
sparser
"Analysis of several satellite cell regulators revealed that TNFalpha is capable of inhibiting Notch-1 in satellite cells and C2C12 myoblasts, which was also found to be dependent on NF-kappaB."
TNF affects HRH1
| 2
TNF inhibits HRH1.
| 1
TNF inhibits HRH1. 1 / 1
| 1
sparser
"These results show that IL-1 alpha and TNF-alpha inhibit histamine- and carbachol-stimulated isolated parietal cell secretion and that, for IL-1 alpha, this effect does not depend on mucosal prostaglandin synthesis."
TNF binds HRH1.
| 1
| 1
sparser
"The release of pre-formed histamine and TNF-α and the newly-formed arachidonic acid metabolites are largely responsible for the early symptoms of the asthmatic reaction including bronchoconstriction [ xref , xref ]."
| PMC
TLR4 affects BST2
| 2
| 2
sparser
"This study was aimed to assess the effects of BUD, ACL and FO in bronchial epithelial cells exposed to cigarette smoke extract (CSE) by evaluating: a) Expression of TLR4 and survivin and LPS binding by flow cytometry; b) expression of HDAC2, HDAC3, SIRT1 and FoxO3 and activation of the ERK 1/2 pathway by western blot; c) IL-8 mRNA levels and release by Real Time-PCR and ELISA, respectively."
sparser
"This decrease in TLR4 mRNA was associated with decreased surface expression of TLR4/MD2 complex, measured by flow cytometry (66 ± 14%, n=4, p <0.03) ( xref )."
THBS1 affects ITGAV
1 1 |
1 |
biogrid
No evidence text available
1 |
hprd
No evidence text available
THBS1 affects F3
| 2
| 2
sparser
"However, further studies are required to determine whether TIPE2 participates in the pathogenesis of asthma by interacting with the coagulation substances TF and TSP-1."
sparser
"The results of the current study indicated that anti-inflammatory TIPE2 levels are associated with levels of the coagulation substances TF and TSP-1."
RYR2 affects CALU
| 1 1
| 1 1
reach
"Evidence suggests that calumenin interacts with RyR2 and SERCA2, and therefore changes in the expression of calumenin could alter Ca2+ cycling in mouse heart."
sparser
"Evidence suggests that calumenin interacts with RyR2 and SERCA2, and therefore changes in the expression of calumenin could alter Ca2+ cycling in mouse heart."
RPN1 affects OPRM1
2 |
RPN1 binds OPRM1.
1 |
1 |
signor
"Ribophorin i (rpni), a component of the oligosaccharide transferase complex, could directly interact with mor. Rpni can be shown to participate in mor export by the intracellular retention of the receptor after small interfering rna knockdown of endogenous rpni."
RPN1 activates OPRM1.
1 |
RPN1 activates OPRM1. 1 / 1
1 |
signor
"Ribophorin i (rpni), a component of the oligosaccharide transferase complex, could directly interact with mor. Rpni can be shown to participate in mor export by the intracellular retention of the receptor after small interfering rna knockdown of endogenous rpni."
PTPRA affects CD63
| 1 1
| 1 1
sparser
"Immunoprecipitation of tissue lysates from renal cortex and outer medulla or 293T cells transfected with CD63 reveals that CD63 was associated with RPTPalpha both in situ and in transfected cells."
trips
"Immunoprecipitation of tissue lysates from renal cortex and outer medulla or 293T cells transfected with CD63 reveals that CD63 was associated with RPTPalpha both in situ and in transfected cells."
PTGER4 affects IL1B
| 2
| 2
reach
"Furthermore, IL-1 beta can interact with NO and PGE2 during steroid genesis [XREF_BIBR]."
reach
"Following the above concept, we have at- tempted to characterize in vitro the interactions between IL-1B, IL-6, TNF-ot, LTB4 and PGE2, the major pro in- flammatory cytokines and eicosanoids of hp-Mth."
NR3C2 affects BST2
| 2
| 2
sparser
"Proc Natl Acad Sci, US 73, 2881-2886 46 Darzynkiewicz Z, Traganos F, Staiano- Coico I,, Kapuscin- ski J, Melamed MR (1982) Interactions of rhodamine 123 with living cells studied by flow cytometry."
sparser
"Cytometry 1, 98-108 30 Darzynkievicz Z, Traganos F, Staiano-Coico L, Kapunscin- ski J, Melamed MR (1982) Interactions of rhodamine 123 with living cells studied by flow cytometry."
NPC1 affects CTSD
| 1 1
| 1
reach
"It has been recently shown that aspartyl cathepsin CtsD most likely indirectly binds to NPC1 and that NPC1 could modulate CtsD levels and processing [XREF_BIBR]."
CTSD binds ABCA1 and NPC1. 1 / 1
| 1
sparser
"First, CYCLO stimulated lysosomal proteolytic activity by increasing cathepsin D activity, levels of cathepsins B and D and two proteins known to interact with cathepsin D, NPC1 and ABCA1."
KRT1 affects CTSD
| 1 1
| 1 1
reach
"In the MB-435-based network 2 (XREF_FIG), the involvement of the TNFalpha and TGFbeta signaling axis is associated with RPSA, GLO1, and CTSD interactions with TNF as well as CTSD and KRT1 interactions with TGFB1."
sparser
"In the MB-435-based network 2 ( xref ), the involvement of the TNFα/TGFβ signaling axis is associated with RPSA, GLO1, and CTSD interactions with TNF as well as CTSD and KRT1 interactions with TGFB1."
JMJD6 affects CALR
| 2
| 2
sparser
"The cytoplasmic calreticulin binds to phosphatidylserine in the inner leaflet of the plasma membrane from where it is externalized as the plasma membrane loses its asymmetry."
sparser
"The second suggested pathway, relevant to apoptotic cells, involves the binding of cytosolic calreticulin to phosphatidylserine on the inner leaflet of the plasma membrane prior to apoptotic exposure of phosphatidylserine-calreticulin complexes on the cell surface ( xref )."
JMJD6 affects BST2
| 2
| 2
sparser
"Cytoplasmic free calcium mobilization in platelets, expression of P-selectin, phosphatidylserine, and microparticle formation, measured by whole blood flow cytometry, in hypertensive patients."
sparser
"We quantified the binding of fluorescent Annexin V to accessible phosphatidylserine in the outer cell membrane by cytometry, as a measure of early apoptotic events."
IL1RN affects F3
| 2
IL1RN inhibits F3.
| 1
IL1RN inhibits F3. 1 / 1
| 1
sparser
"Analysis of the expression kinetics and regulation by IL-1 of the β-glucan-induced TFs identified by the genome-wide gene expression study uncovered the NFKBIZ gene (encoding IκB-ζ) as the earliest expressed, β-glucan-induced, TF that was inhibited by IL-1RA."
IL1RN binds F3.
| 1
| 1
sparser
"These treatments were also associated with increased IL-1ra, CD142, and VEGF ( xref , xref )."
IL1B affects SDC4
| 2
IL1B increases the amount of SDC4. 2 / 2
| 2
reach
"Wang et al. have demonstrated that IL-1beta treatment increases syndecan-4 (SDC4) expression and its promoter activity by activating NF-kappaB, leading to enhanced ADAMTS-5 synthesis and aggrecan degradation in human NP cells [72]."
reach
"Importantly, analysis of human NP tissues showed a strong correlation between levels of SDC4 and ADAMTS-5 with aggrecan neoepitopes, suggesting that an increase in SDC4 expression by cytokines IL-1beta and TNF-alpha contributes to aggrecan turnover in human disease."
IL1B affects PTGFR
| 2
IL1B increases the amount of PTGFR. 2 / 2
| 2
reach
"Induction of cyclooxygenase-2 and prostaglandin F2alpha receptor expression by interleukin-1beta in cultured human granulosa-luteal cells."
reach
"The IL-1beta treatment implicated by microarray analysis increased gene expression levels of PTGS-2, PTGFR, NFkappa-B p65, IL-17, and IL-8."
IL1B affects ITGB1
2 |
Transcriptionally active IL1B decreases the amount of ITGB1. 2 / 2
2 |
biopax:ctd
No evidence text available
biopax:ctd
No evidence text available
HLA-DRB5 affects CD44
| 2
| 2
sparser
"In addition, CD44 and HLA-DRB5 which are directly interacted with HLA-A are known to be implicated by interferon signals in different cancers [ xref – xref ]."
sparser
"For example, HLA-A directly interact with CD44 and HLA-DRB5 which are known to be related with interferon signaling in carcinogenesis."
FCGR1A affects IGF1R
| 2
FCGR1A activates IGF1R. 2 / 2
| 2
sparser
"Many years later, Pritichard et al. reported that IGF-I and GD-IgG could bind and activate IGF-IR ( xref )."
sparser
"Importantly, the finding of an induction by GD-IgG on hyaluronan production in the face of no response to TSH suggests the potential for GD-IgG activating IGF-1R. In aggregate, the reports of van Zeijl et al ( xref ) may share important similarities with that of Smith and Hoa ( xref )."
ENO1 affects EDNRA
| 2
| 2
sparser
"Ru(PPh(3))(3)HCl reacts with 1,1'-bis(diphenylphosphino)ferrocene (dppf) to give the 16-electron complex Ru(dppf)(PPh(3))HCl (1d), which upon treatment with NaBAr(4)(F), affords [Ru(dppf){(eta(6)-C(6)H(5))PPh(2)}H]BAr(4)(F) (8), in which the PPh(3) ligand binds eta(6) through one of the PPh(3) phenyl rings."
sparser
"A slightly bulkier m-terphenyl thiolate, SDmp, prevents its nickel complex from forming a Ni-Ni bond, and the mononuclear nickel(I) center of 3 is bound to PPh(3) and SDmp through interactions with the sulfur and a eta(2)-mesityl."
CXCR4 affects BST2
| 2
| 2
sparser
"At multiple time points, we measured binding to surface CXCR4 by flow cytometry using 3 anti-CXCR4 antibodies: 12G5, 1D9, and 2B11."
sparser
"We next examined the binding of HCLX to cell-surface CXCR4 by flow cytometry."
CD44 affects BST2
| 2
| 2
sparser
"Given that circulating CD45 - CD90 + CD44 + cells detected by flow cytometry were associated with early HCC recurrence, circulating cancer stem cell markers may have significant prognostic values in HCC [ xref ]."
sparser
"Treatment of MUC1-positive CD138+ cells from LEN-sensitive Patient 1 with GO-203 was associated with suppression of CD44 expression as determined by flow cytometry ( xref , left; xref )."
CALR affects PTGER3
| 2
CALR inhibits PTGER3. 2 / 2
| 2
sparser
"The phagocytosis of latex particles and the release of superoxide, PGE and TNF-α is almost totally inhibited by RO 31-8220."
sparser
"The release of superoxide and PGE in THP-1 cells is almost totally inhibited by RO 31-8220 and by transfection of THP-1 cells with CMV-asPKC-α ."
CALR affects ABCA1
| 2
CALR binds ABCA1.
| 1
| 1
sparser
"The promising anti-inflammatory effect of SSa on LPS-stimulated primary mouse macrophages is associated with up-regulation of the LXRα-ABCA1 pathway which result in disrupting lipid rafts and reducing translocation of TLR4 to lipid rafts, thereby suppressing TLR4 mediated NF-κB and IRF3 signaling pathways induced by LPS."
CALR activates ABCA1.
| 1
CALR activates ABCA1. 1 / 1
| 1
sparser
"Moreover, SSa activated LXRα, ABCA1 and ABCG1."
VDAC3 affects RPN1
1 |
1 |
biogrid
No evidence text available
TTYH3 affects TNFRSF1A
1 |
biogrid
No evidence text available
TTYH3 affects S1PR1
1 |
1 |
biogrid
No evidence text available
TTYH3 affects PTGIR
1 |
1 |
biogrid
No evidence text available
TTYH3 affects LPAR1
1 |
1 |
biogrid
No evidence text available
TSPO affects TNF
| 1
| 1
sparser
"The decrease in TSPO mRNA was associated with a decrease in TNFα mRNA as well as a decrease in CXCL10."
TRPM4 affects TNF
| 1
| 1
sparser
"Coexpression of Sur1 and Trpm4 in necrotic endothelial cells was also associated with vasogenic edema indicated by upregulated perivascular tumor necrosis factor, extravasation of serum immunoglobulin G, and associated inflammation."
TNFRSF1A affects IL1B
| 1
| 1
reach
"Previous studies reported that IL1beta and TNFalpha exert toxic effects by binding to their cognate receptors, IL1-R1 and TNFR1, respectively, triggering downstream signaling pathways that activate transcription factors, such as NFkappaB or AP1 which in turn lead to the production of NO and ROS."
TNFRSF1A affects CD63
| 1
| 1
reach
"The MV preparations consisted of phospholipid bound vesicles containing the serum proteins albumin, fetuin-A, and apolipoprotein A1; the mineralization associated enzyme alkaline phosphatase; and the exosome proteins TNFR1 and CD63."
TNFRSF11A affects BST2
| 1
sparser
"For the RANK expression analysis, a concordant expression pattern was observed using mAbs in IHC on a variety of positive and negative controls compared with expression analysis tested using other methods, such as flow cytometry using mAbs which bind RANK via distinct epitopes and RT-PCR."
TNF affects TGFBR1
| 1
| 1
sparser
"Although the data obtained to date are preliminary, they confirm that the binding of TNFa to its type I receptor is associated with endothelial cell activation and hypotension."
TNF affects SORL1
| 1
| 1
sparser
"Here we showed that Ldlr gene deficiency was associated with an impaired overexpression of both IL-6 and TNFα during the early phases of liver regeneration after PH."
TNF affects RTN4R
| 1
| 1
sparser
"In fact, tumor vessels, but not other CD13-expressing tissues, express a functionally active form of CD13 that binds NGR-TNF [ xref ]."
TNF affects ROBO2
| 1
| 1
reach
"Slit processing generates an N-terminal fragment (SlitN) that binds to Robo1 and Robo2 receptors and mediates Slit repulsive activity, as well as a C-terminal fragment (SlitC) with an unknown receptor and bioactivity."
TNF affects PTGER3
| 1
| 1
sparser
"These effects were associated with an increase in levels of PGE(2) and TNF-α."
TNF affects PDGFRA
| 1
TNF phosphorylates PDGFRA. 1 / 1
| 1
sparser
"TNF-α stimulated c-Src, PDGFR, and EGFR phosphorylation, which were reduced by PP1."
TNF affects PAQR3
| 1
TNF inhibits PAQR3. 1 / 1
| 1
sparser
"The possibility that TNFα is a more general antagonist of human PAQRs is supported by data shown in xref , which demonstrate TNFα-dependent inhibition of basal signaling of PAQR3, PAQR4, mPRγ, mPRβ and PAQR11."
TNF affects OPRM1
1 |
Transcriptionally active TNF increases the amount of OPRM1. 1 / 1
1 |
biopax:ctd
No evidence text available
TNF affects NTRK3
| 1
| 1
reach
"This assay showed that TrkC interacted with the N-terminal fragment containing the RING motif and C 2 H 2 zinc fingers of NTRAP (ZFS), but not with its C-terminal half (NTRAPc; XREF_FIG, A and B)."
TNF affects NALCN
| 1
| 1
sparser
"However, clinical use of non-selective TNF inhibitors is associated with an increased risk of infections."
TNF affects MMD
| 1
TNF inhibits MMD. 1 / 1
| 1
sparser
"The possibility that TNFα is a more general antagonist of human PAQRs is supported by data shown in xref , which demonstrate TNFα-dependent inhibition of basal signaling of PAQR3, PAQR4, mPRγ, mPRβ and PAQR11."
TNF affects LY96
| 1
| 1
sparser
"Furthermore, a genetically determined higher activity of LY96 (−1625 C>G) and TNFA (−308 G>A) was associated with reduced risk of UC."
TNF affects LGR5
| 1
| 1
sparser
"Results : Pten loss in Lgr5 + HFSCs promoted SCC formation, which was attenuated in TNF -/- mice."
TNF affects KCNK2
| 1
| 1
reach
"This binding was selective since NT was unable to displace the binding of 125 I-spadin and the N-terminal fragment Gln1-Arg16 bound to TREK-1 with a very low affinity (1 microM) close to that reported with NTSR3 and sortilin (XREF_FIG) XREF_BIBR."
TNF affects KCNA3
| 1
TNF activates KCNA3. 1 / 1
| 1
sparser
"Tumor necrosis factor-alpha-induced activation of macrophages increased Kv1.3 with no changes in Kv."
TNF affects ITGB3
1 |
Transcriptionally active TNF increases the amount of ITGB3. 1 / 1
1 |
biopax:ctd
No evidence text available
TNF affects IL17RC
| 1
| 1
sparser
"It has been shown that the full-length IL-17RC formed homodimer and inhibited TNFα-induced apoptosis in prostate cancer cells [ xref ]."
TNF affects IL10RB
| 1
| 1
sparser
"Furthermore, LGG -dependent increases in IL-10R2 were associated with reductions in TNF-α, MIP-2 and disease severity in a murine model of intestinal injury in the immature colon."
TNF affects GRIA1
| 1
TNF phosphorylates GRIA1 on S863. 1 / 1
| 1
reach
"Carrageenan induces TNF dependent phosphorylation of GluR1 at ser 845."
TNF affects GAL
| 1
TNF binds GAL. 1 / 1
| 1
sparser
"In contrast, Pioglitazone-induced PPARγ activation exacerbated D-galactosamine (GalN)/lipopolysaccharide (LPS) hepatitis associated with an increased production of TNFα by Kupffer cells and increased sensitivity of hepatocytes towards TNFα after in vivo Pioglitazone administration."
TNF affects FGFR1
| 1
| 1
sparser
"Here, we show that FGFR-1 can interact with the TNF receptor superfamily member fibroblast growth factor-inducible molecule 14 (Fn14) resulting in cardiomyocyte cell cycle reentry."
TNF affects F2R
| 1
TNF binds F2R. 1 / 1
| 1
sparser
"Results showed that dsVEGF-706 transfection restored the endothelial-like tube formation of HTR-8/SVneo cell that was inhibited by TNF-α."
TNF affects CUL5
| 1
TNF increases the amount of CUL5. 1 / 1
| 1
sparser
"Here, we found that TNFα-induced VACM-1 expression was reduced by an NF-κB inhibitor Bay11-7082 ( xref B,C)."
TNF affects CRY1
| 1
TNF inhibits CRY1. 1 / 1
| 1
sparser
"Additionally, exogenous TNF-α inhibited c-cbl protein level vice versa."
TNF affects CELSR2
1 |
1 |
biogrid
No evidence text available
TNF affects CACNA1B
| 1
| 1
sparser
"Inhibition of N-type VGCCs following TNFalpha incubation was associated with a decrease in CaV2.2 mRNA and reduced membrane localization of CaV2.2 immunoreactivity."
TNF affects ATP6AP2
| 1
| 1
sparser
"In summary, renal ischemia is associated with increased expression of PRR, NF-κB, the inflammatory cytokine TNF-α, and UACR."
TMEM63B affects RPN1
1 |
1 |
biogrid
No evidence text available
TLR4 affects IL1RN
| 1
| 1
sparser
"Prior research indicates an interaction between IL-1ra and TLR4 in a mouse model of arthritis, as TLR4 stimulation enhances arthritis severity in IL-1ra deficient mice whereas TLR4 deficiency is protective ( xref )."
TLR4 affects CALR
| 1
| 1
reach
"Calreticulin, HMGB1 and HSPs, and ATP then interact with the receptors CD91, Toll like receptor 4 (TLR4), and purinergic P2X7 receptors, respectively, which are present on the surface of DCs."
THBS1 affects S1PR1
| 1
| 1
sparser
"We then performed a ChIP assay to elucidate whether the interaction of mutant p53 with Rad21 affects its binding to the transcription factor-binding site of the S1PR1 and THBS1 genes."
THBS1 affects NOTCH1
| 1
| 1
reach
"TSP1 binds Notch1 by complexing with Jagged1 [XREF_BIBR] and/or Contactin [XREF_BIBR] to inhibit NPC differentiation into oligodendrocytes, thereby promoting their differentiation into nerve cells."
THBS1 affects IL6ST
| 1
| 1
sparser
"Among other seven genes, gene FCGR2A is associated with SLE, gene HSPA1A is involved in antigen-processing, genes THBS1 and IL6ST are associated with cytokine-cytokine receptor induced signaling, and genes GADD45A, THBS1, and CHEK1 are associated with p53 signaling pathway."
THBS1 affects CACNA2D1
| 1
reach
"Immunoprecipitation with anti-FLAG antibodies revealed that the SD2-alpha2delta-1 interaction was diminished in the presence of GBP (XREF_FIG) suggesting that GBP blocks TSP induced synapse formation by interfering with the interaction between alpha2delta-1 and TSP."
SORT1 affects IL1RN
| 1
| 1
reach
"Using chemical cross linking and the yeast two-hybrid system, we show that sortilin interacts with Glut4 and IRAP in the vesicular lumen."
SORT1 affects CALR
| 1
| 1
sparser
"However, mitochondrial associations of SORT1, CALR, and RAB1A and T2DM-associated alterations of their protein levels in the MAM or mitochondria have been never reported in insulin-secreting or responsive tissues/cells."
SCARB2 affects CTSD
| 1
| 1
sparser
"The dispersed lysosomes associated with cathepsin D and LIMPII were not colocalized with early endosomes, and these vesicles were not inaccessible to the endocytosed anti-transferrin receptor antibody."
RPN1 affects NTRK1
1 |
1 |
biogrid
No evidence text available
RPN1 affects LGR4
1 |
1 |
biogrid
No evidence text available
RPN1 affects ERBB3
1 |
1 |
biogrid
No evidence text available
RPN1 affects DERL1
1 |
1 |
biogrid
No evidence text available
RPN1 affects CRY2
1 |
1 |
biogrid
No evidence text available
PTPRO affects CALR
1 |
1 |
biogrid
No evidence text available
PTPRF affects IL1B
| 1
| 1
sparser
"As shown in xref , LAR was positively associated with IL-1β (r=0.41, p<0.001)."
NTRK1 affects ENO1
1 |
1 |
biogrid
No evidence text available
NTRK1 affects CALU
1 |
1 |
biogrid
No evidence text available
NTRK1 affects CALR
1 |
1 |
biogrid
No evidence text available
NR3C2 affects IL1B
| 1
| 1
sparser
"Molecular sieve chromatography of TAT-IC-activated serum confirmed that 125I-IL-1 beta became bound to high Mr serum proteins."
NLGN3 affects CTSD
1 |
1 |
biogrid
No evidence text available
NALCN affects BST2
| 1
| 1
sparser
"To assess the cellular function of the P2X7 receptor in patients with active disease and healthy controls, we determined the non-selective pore formation induced by ATP by flow cytometry."
M6PR affects ENO1
1 |
1 |
biogrid
No evidence text available
LRP1 affects IL1RN
| 1
| 1
sparser
"Golgin-160 likely acts together with p115, another Golgi matrix protein that binds IRAP and LRP1, to sequester GSVs within unstimulated cells [ xref , xref , xref ]."
LRP1 affects IL1B
| 1
| 1
sparser
"IL-1RtI knockout mice were resistant to the APR induced by peripherally injected murine IL-1 beta, suggesting that it is not the interaction of endogenous IL-1 beta with IL-1RtII that induces an APR to LPS in these mice."
LIFR affects IL1RN
| 1
| 1
sparser
"Indeed, the latter condition is not associated with changes in serum LIFR or IL-1RA levels, but with a different profile of serum IL-6R production."
LGR4 affects CALR
1 |
1 |
biogrid
No evidence text available
ITGB3 affects CD63
| 1
| 1
sparser
"We found that at concentration of 50–100 µg/ml GA decreased MFI levels of active form of αIIbβ3 integrin and CD63 by 43±5% and 57±4%, respectively for thrombin-activated human platelets ( xref ), and decreased ∼2-fold MFI levels of active form αIIbβ3 integrin and CD31 for thrombin-activated mouse platelets ( xref )."
INSR affects IL1B
| 1
| 1
sparser
"DM2 could potently modulate angiogenesis by the interaction of IL-1β with downstream insulin receptor and upstream androgen receptor."
INSR affects FCGR1A
| 1
| 1
sparser
"Free IGF-1 has a short half life, but at high levels it can bind to both the IGFR1 and insulin receptor (IR) to exert an anabolic effect."
IL6ST affects IL1B
| 1
| 1
reach
"Interleukin (IL) -6 functions downstream of IL-1beta and has unique signal pathways : classic- or trans-signaling via membrane bound IL-6R or soluble IL-6R (sIL-6R)."
IL1RN affects FGFR1
| 1
| 1
sparser
"CLCA4, ANXA9, GPR110, IL1RN, KLK12, PPARD, FLG and HSP90AAl are smoking dependent DEGs whereas GPR110, IL1RN and HSP90AAl are associated with lung cancer FLG is co-expressed with several query genes which are enriched in different cellular growth promoting pathways and FLG together with other genes plays key role in epidermal cell regulation."
IL1R1 affects ENO1
| 1
| 1
reach
"These results suggested that p80, which is generated from ErbB4 and translocates to the nuclei, interacts with alpha-enolase and inhibits neuregulin1 dependent ErbB4 mediated cell proliferation by impairing the c-myc gene transcription."
IL1B affects NALCN
| 1
IL1B activates NALCN. 1 / 1
| 1
sparser
"In addition, using slow voltage ramps we demonstrated that IL-1beta activates a non-selective cationic current (INSC) with a reversal potential of -38.8 +/- 1.8 mV."
IL1B affects GRIA1
| 1
| 1
sparser
"IL-1β affects various classical neurotransmitter systems, and there is evidence that the NMDA glutamate receptor and IL-1β interact with each other."
IL1B affects FGFR1
| 1
| 1
sparser
"In a mouse model of human breast cancer, fibroblast growth factor receptor 1-induced mammary tumorigenesis is associated with local production of IL-1β and can be blocked by treatment with an IL-1β neutralizing antibody (Reed et al., xref )."
IL1B affects CRY1
| 1
| 1
sparser
"Interestingly, although IL1β and IL-18 and their cellular receptors are related proteins, IL-18BP and IL-1βR displayed high specificity towards their targets: IL-18BP was not able to bind IL-1β and vice versa IL-1βR did not bind IL-18 [ xref ]."
IL1B affects CLIC1
| 1
IL1B increases the amount of CLIC1. 1 / 1
| 1
reach
"The intracellular chloride channel proteins CLIC1 and CLIC4 induce IL-1beta transcription and activate the NLRP3 inflammasome."
IL1B affects AQP1
| 1
| 1
sparser
"AQP1 deficiency is associated with a marked reduction of both lung IL-1β release and neutrophilic inflammation."
IL1B affects AGTR1
| 1
| 1
sparser
"In this study, we determined whether an interaction between IL-1β and AT1-R in the paraventricular nucleus (PVN) contributes to progression of HF."
IL15RA affects BST2
| 1
| 1
sparser
"More importantly, the increased mRNA expression of IL-15Rα was associated with an increased IL-15Rα cell-surface expression as determined by flow cytometry after 48h of incubation with IFN-α with a more than two-fold increase in mean fluorescence intensity (MFI) (, middle panel)."
HRH1 affects CD63
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sparser
"Electron micrographs of RBL cells and human basophils suggest that CD63 is associated with histamine containing granules [ xref - xref ]."
FCGR1A affects SCARB1
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sparser
"Our findings that anti-SR-BI IgG blocks SR-A −/− microglial adhesion to fAβ-containing matrices by ∼40% while fucoidan blocks adhesion of both SR-A +/+ and SR-A −/− microglia by ∼75% ( Fig. 3a ) suggest that, assuming complete inhibition of SR-BI by anti-SR-BI IgG, scavenger-like receptors other than SR-A and SR-BI (e.g. RAGE, LRP, LOX-1, Fcγ-receptors ( Terry, 1999 )), also promote adhesion of microglia to fAβ-containing surfaces, and that unlike SR-A and SR-BI some of these other receptors are not inhibited by fucoidan."
FCGR1A affects DNER
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FCGR1A inhibits DNER. 1 / 1
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sparser
"Furthermore, 2PAPB-PreS–induced IgG inhibited Bet v 1–induced basophil activation in allergic patients and CD23-facilitated allergen presentation."
ENO1 affects EFEMP1
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1 |
biogrid
No evidence text available
ENO1 affects EBP
1 |
1 |
biogrid
No evidence text available
ENO1 affects CUL5
1 |
1 |
biogrid
No evidence text available
ENO1 affects CD4
1 |
1 |
biogrid
No evidence text available
ENO1 affects ATP6AP2
1 |
1 |
biogrid
No evidence text available
EMB affects EDNRB
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sparser
"Using isothermal titration calorimetry and surface plasmon resonance assays, we observed that EMB binds EtbR in a 1:1 ratio and thereby stimulates its DNA-binding activity."
EIF2D affects CALU
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1 |
biogrid
No evidence text available
CUL5 affects CTSD
1 |
1 |
biogrid
No evidence text available
CTSD affects CD4
1 |
1 |
hprd
No evidence text available
CHRNA7 affects BST2
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sparser
"We assayed interaction of the amyloid beta peptide with SH-SY5Y cells using flow cytometry for the detection of the fluorescence signal of FITC-labelled A β 1–42 peptide after 5, 10, 15, and 30 min and after 1, 3, 18, and 24 h."
CD63 affects CD44
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sparser
"Other studies have also reported that TIMP-1 can bind to CD63 or the pro-MMP9/CD44 complex, thereby activating survival pathways in some cells [ xref , xref ]."
CASR affects IL1B, and TNF
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TNF binds CASR and IL1B. 1 / 1
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sparser
"The hypocalcemia of critically ill patients with burn injury or sepsis is associated with CASR gene upregulation by TNF-alpha and IL-1beta via kappaB elements, and by IL-6 via Stat1/3 and Sp1/3 elements in the CASR gene promoters, respectively."
BST2 affects KCNH2
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BST2 inhibits KCNH2. 1 / 1
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sparser
"To test for such a scenario, the population of K562 cells with degraded DNA (subG 1 population) was determined in dependence on hERG1 inhibition (0 or 1 µM E4031) by flow cytometry (propidium iodide Nicoletti staining) 24 h after irradiation with 0 or 5 Gy ( xref )."
BST2 affects ITGB3
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BST2 activates ITGB3. 1 / 1
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sparser
"As platelet granule secretion induced by agonist stimulation plays critical roles in the amplification of platelet signaling and subsequent activation and aggregation, we also measured platelet degranulation, represented by P-selectin expression and αIIbβ3 activation by flow cytometry."
BST2 affects ANTXR1
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sparser
"Using this strategy, a monoclonal antibody, called AF334, was identified that, like SB5, was able to bind both mouse and human TEM8 by flow cytometry."