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phosphosite cbn pc11 biopax bel_lc signor biogrid lincs_drug tas hprd trrust ctd virhostnet phosphoelm drugbank omnipath | geneways tees isi trips rlimsp medscan sparser eidos reach
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IL1B affects IL1R1
5 1 34 | 32 5
IL1B binds IL1R1.
1 17 | 32 5
1 17 | 28 5
sparser
"IL-1R1, which binds to both IL-1α and IL-1β, can be detected in a variety of cell types, whereas the IL-1R2 is found on the cell surface of type B lymphocytes, neutrophils and macrophage, and binds with IL-1β with higher affinity[ xref ]."
sparser
"In contrast, IL-1Ra acts as an antagonist of IL-1R1, preventing the binding of IL-1α and IL-1β with IL-1R1, respectively."
sparser
"Binding of IL-1R1 with IL-1α or IL-1β leads to subsequent recruitment of IL-1RAcP at the cell membrane [ xref ] and downstream cytosolic NF-κB activation."
sparser
"IL-1ra is a cytokine produced by monocytes, macrophages, and dendritic cells, which prevents the binding of IL-1α as well as IL-1β to IL-1R1 by competitively blocking IL-1RI receptors [ xref , xref ]."
sparser
"Both IL-1α and IL-1β bind to IL-1R1 and form an activating complex with the signaling chain IL-1R3."
sparser
"Both IL-1α and IL-1β bind to same IL-1R, and bone marrow-derived macrophages produced both IL-1α and IL-1β in response to LCWE in vitro ( xref )."
sparser
"Although both IL-1α and IL-1β can interact with IL-1R1 to induce downstream transcription of inflammatory genes, they show considerable differences in their localization, regulation, and function."
sparser
"Following binding of IL-1α or IL-1β to the type I IL-1R, a second protein, the IL-1 receptor accessory protein (AcP), is recruited to the complex (Greenfeder et al., 1995) ."
sparser
"Because mice deficient in the IL-1R cannot respond to IL-1, this result demonstrated that either IL-1α or IL-1β, both of which bind to the IL-1R, contributed to acute pathology after rVSV immunization."
sparser
"IL-1α and IL-1β bind to IL-1R1 complexed to the IL-1 receptor accessory protein and induce similar physiological effects."
sparser
"Downstream of IL-1β activation, pharmacological inhibition of IL-1R with anakinra resulted in decreased TAA formation similar to IL-1β and IL-1R knockout mice."
sparser
"These residues are poorly conserved in the deduced sequences encoding halibut and other teleost IL-1β [ xref – xref ], indicating the involvement of other amino acids in the interaction between fish IL-1β and IL-1Rs."
biogrid
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sparser
"A model of IL-1RAcP was calculated on the basis of alignment of primary sequence and secondary structure with IL-1R, and then modeled on the crystal structure of IL-1R bound to IL-1β ."
sparser
"Binding of IL-1β to the IL-1R1 induces formation of a signaling complex with the IL-1 receptor accessory protein, which are both members of the Toll-like receptor family of proteins [ xref , xref ]."
reach
"Previous studies reported that IL1beta and TNFalpha exert toxic effects by binding to their cognate receptors, IL1-R1 and TNFR1, respectively, triggering downstream signaling pathways that activate transcription factors, such as NFkappaB or AP1 which in turn lead to the production of NO and ROS."
reach
"In addition, IL-1beta interaction with IL-1R1 on ECs induces migration of the cells and tube formation, mainly via activation of p38-mitogen-activated protein kinase (MAPK) and MAPK activated protein kinase 2."
sparser
"Microglia-derived IL-1β also binds to IL-1R1 on the abluminal endothelial surface, causing BMEC to release signals that further increase microglial IL-1β production and also trigger IL-6 and prostaglandin synthesis."
sparser
"The ability of Vhp19 to interfere with IL-1β binding to IL-1R was assessed and compared to inhibition of IL-1β biological activity."
reach
"The affinity of IL-1R2 for IL-1beta is 10 -10 M, while its affinity for IL-1alpha is 100 times less at 10 -8 M. IL-1R1 binds IL-1alpha at 10 -10 M, but binds IL-1beta at 10 -9 M."
reach
"The major IL-1 family members are IL-1 alpha (IL-1alpha) and IL-1 beta (IL-1beta), both of which bind to the cell surface IL-1 Receptor 1 (IL-1R1) 16."
reach
"When IL-1beta binds to IL-1R, the RhoGDI becomes phosphorylated by mechanisms that are not entirely clear and releases Rac1-GDP."
omnipath
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sparser
"Herein, we describe in vitro and in vivo nonclinical Investigational New Drug (IND)-enabling studies of EBI-005, a novel protein chimera of IL-1β and IL-1 receptor antagonist (IL-1Ra or anakinra) that potently binds IL-1R1 and blocks signaling."
sparser
"Of the three forms of IL-1, soluble type II IL-1R binds IL-1 beta with highest affinity and also selectively inhibits IL-1 beta activity."
sparser
"IL-1RI binds IL-1α, IL-1β and IL-1R antagonist (IL-1Ra)."
sparser
"Once extracellular, IL-1α and mature IL-1β bind to the IL-1R1 to initiate downstream signalling in a range of cell types [ xref ]."
sparser
"Saturation binding analysis indicates an equilibrium dissociation constant (KD) of 350 pM for the binding of IL-1R-IgG to its ligand, IL-1 beta."
sparser
"Because mice deficient in the IL-1R cannot respond to IL-1, this result demonstrated that either IL-1a or IL-1b, both of which bind to the IL-1R, contributed to acute pathology after rVSV immunization."
sparser
"IL-1B and IL-1A are encoded by distinct genes and bind both to IL-1R1, found on nearly every cell and IL-1R2 ( xref )."
sparser
"Interleukin-1α (IL1α) and interleukin-1β (IL1β) both bind to IL-1R1 to initiate cell signaling."
sparser
"IL1R2 (2q11): Interleukin 1 receptor, type II binds IL1a, IL1b and IL1R1, inhibiting the activity of these ligands."
sparser
"The binding of IL-1alpha or IL-1beta to IL1R is an early step in IL-1 signal transduction and blocking this interaction may therefore be a useful target for the development of new drugs."
omnipath
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omnipath
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sparser
"However, unexpectedly, the IL-1β-induced interaction between IL-1R and IL-1RAcP was unaffected in cells pretreated with brazilin ( Fig. 6 A, top left panel, fourth to sixth rows), indicating that down-regulation of IL-1β responsiveness by brazilin is independent of the heterodimerization between IL-1R and IL-1AcP."
sparser
"A model for the interaction of the extracellular parts of type I IL-1R and IL-1RAcP with IL-1β was proposed [68] ."
IL1B binds IL1R1 and IL1RN. 3 / 3
| 3
sparser
"The type I IL-1R binds IL-1α, IL-1β and the receptor antagonist IL-1Ra (reviewed in Ref. [65] )."
sparser
"In addition, IL-1R1 can be released into the extracellular space where, in its soluble form (sIL-1R1), it can also function as a soluble decoy receptor and prevent the binding of IL-1α, IL-1β, and IL-1Ra to membrane IL-1R1 ( xref )."
sparser
"On the mRNA level of MSC, we found IL1RN, which binds to IL1R on the cell surface with subsequent inhibition of the IL1beta signaling pathway, to be upregulated from a low basal level of expression upon stimulation with the PTC (318-fold) or IL1beta (107-fold) and to remain unchanged after stimulation with IL6, IL8, C3a and C5a in concentrations used in the “cocktail” ( xref )."
TLR4 binds IL1B and IL1R1. 1 / 1
| 1
sparser
"IL-1β or LPS binding to IL-1R or TLR4, respectively, results in the rapid association of the adaptor molecule Myd88 with the receptors and subsequent recruitment of the kinases IRAK1 and IRAK4. xref Activation and phosphorylation of IRAK kinases leads to the recruitment of the E3 ubiquitin ligase TRAF6 which undergoes K63-linked autoubiquitination and serves as a scaffold to recruit TAK1 and IKK kinases through binding to TAB2/3 and NEMO, respectively. xref TAK1 is subsequently activated and triggers IKK/NF-κB and mitogen-activated protein kinase/c-Jun N-terminal kinase activation. xref "
IL1B activates IL1R1.
5 17 |
IL1B activates IL1R1. 15 / 15
15 |
omnipath
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IL1B activates IL1R1. 5 / 5
5 |
bel
"The IL-1 family of receptors is comprised of ten distinct but related gene products. The receptors are indicated by the term IL-1 receptor (IL-1R) followed by a numeral, assigned chronologically by discovery, for example, IL-1R1, IL-1R2, IL-1R3, etc. The ligand binding chain for IL-1α and IL-1β is IL-1R1 and the accessory chain is IL-1R3."
bel
"After IL-1 binds to IL-1RI, an IL-1RAcP is recruited to form a high affinity IL-1R1-IL-1RAcP heterodimeric receptor, which initiates the downstream signaling cascade."
bel
"After IL-1 binds to IL-1RI, an IL-1RAcP is recruited to form a high affinity IL-1R1-IL-1RAcP heterodimeric receptor, which initiates the downstream signaling cascade."
bel
"Furthermore, IL-18R at least partly shares the signal transducing system with IL-1R. Thus, the IL-18-IL-18R system has a striking similarity to the IL-1-IL-1R system. From entrez gene summary of IL1R1: The protein encoded by this gene is a cytokine receptor that belongs to the interleukin 1 receptor family. This protein is a receptor for interleukin alpha (IL1A), interleukin beta (IL1B), and interleukin 1 receptor, type I(IL1R1/IL1RA). It is an important mediator involved in many cytokine induced immune and inflammatory responses."
bel
"Furthermore, IL-18R at least partly shares the signal transducing system with IL-1R. Thus, the IL-18-IL-18R system has a striking similarity to the IL-1-IL-1R system. From entrez gene summary of IL1R1: The protein encoded by this gene is a cytokine receptor that belongs to the interleukin 1 receptor family. This protein is a receptor for interleukin alpha (IL1A), interleukin beta (IL1B), and interleukin 1 receptor, type I(IL1R1/IL1RA). It is an important mediator involved in many cytokine induced immune and inflammatory responses."
IL1B activates IL1R1 bound to IL1RAP. 2 / 2
2 |
omnipath
No evidence text available
omnipath
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THBS1 affects CD47
16 | 40 8
THBS1 binds CD47.
8 | 40 8
8 | 38 7
sparser
"TSP-1 and SIRP-α bind CD47 IgV loop xref and TSP-1 can inhibit SIRP-α-Fc binding to CD47 expressing-Jurkat cells xref ."
sparser
"The binding of CD47 to either SIRPα or TSP1 provides two anticancer strategies."
sparser
"Given recent insights into the physiological functions of CD47, potential side effects of therapeutic CD47-antibodies such as B6H12, which inhibits both CD47-SIRP and CD47-TSP1 interactions, include altered blood pressure [ xref ], hemolytic anemia, and prothrombotic or antithrombotic activities [ xref , xref ]."
sparser
"Interestingly, both TSP-1 and SIRPα are interacting with CD47 during synaptogenesis xref , xref , xref , xref , which means that other mechanisms appear to be involved in CD47-dependent regulation of the type of nerve fiber growth investigated in the present study."
sparser
"Notably, the widely used CD47 blocking antibody B6H12 inhibits binding of both SIRPα and TSP1 to cell surface CD47 ( xref )."
sparser
"However, CD47 modified nanoparticles showed a prominent anti-phagocytosis property in M1 cells that may in part be due to the complex signalling interactions of CD47 with SIRPα and TSP-1."
sparser
"One approach to avoid these shortcomings is to identify and develop small molecule molecular probes and pretherapeutic agents that would (1) selectively target SIRPα or TSP1 interactions with CD47, (2) provide a route to optimize pharmacokinetics, reduce on-target toxicity and maximize tissue penetration, and (3) allow more flexible routes of administration."
sparser
"This data is consistent with competitive binding of TSP1 and SIRPα to a single site on CD47, steric inhibition of binding to distinct but proximal sites, or allosteric inhibition ( xref )."
sparser
"Thus, we propose that treatment of tumor-bearing animals with CD47 blocking antibodies, which are known to inhibit both SIRPα and TSP1 binding to CD47, could directly modulate adaptive as well as innate anti-tumor immunity."
sparser
"Indeed, CD47 antibody targeting may affect NO pathway modulation and subsequent angiogenesis regulation, since a commonly used CD47-blocking antibody (clone B6H12) was previously shown to concomitantly disrupt both TSP-1:CD47 and CD47:SIRPα interactions ( xref )."
sparser
"The COOH-terminal domain of TSP-1 binds to CD47, also known as integrin-associated protein [ xref ]."
sparser
"The COOH-terminal domain of TSP-1 binds to CD47, also known as integrin-associated protein. [ xref ] This domain also interacts with integrins such as β 1 and β v6 integrins and actively binds to proteoglycans allowing cell adhesion and spreading [ xref ]."
sparser
"To date we have validated TSP1 antibodies that block TSP1 binding to CD47, CD47 antibodies that block TSP1 binding, and antisense approaches that suppress CD47 expression [ xref , xref – xref ]."
reach
"Previous work XREF_BIBR has shown that TNF-alpha up-regulates the TSP1, CD36, and CD47 complex in cultured myoblasts and that the TSP1-CD36-CD47 was up-regulated in sIBM."
sparser
"Finally, results show that TSP-1 utilizes cell surface receptors CD36 and CD47 to augment chemotaxis, but DBP does not bind to TSP-1, CD36 or CD47."
sparser
"Furthermore, this paper also reveals that DBP does not bind to TSP-1, CD36 or CD47 ( xref ) and that TSP-1 utilizes these cell surface receptors to augment chemotaxis to C5a ( xref – xref )."
sparser
"Ligation of CD47 by extracellular thrombospondin-1 is associated with down-regulation of IL-12 production by antigen-presenting cells [ xref ], and inhibits human naive T cell differentiation to Th1 cells but not to Th2 cells [ xref ]."
sparser
"TSP1 can also interact with integrin-bound fibrinogen, which may further increase clustering between IAP and αIIb/β3."
reach
"This anti-angiogenic activity results in part from the ability of physiological concentrations of TSP1 binding to CD47 to control NO signaling, which is necessary for signaling by several pro angiogenic factors [XREF_BIBR]."
sparser
"Otherwise, TSP-1 binding to CD47 also inhibits differentiation of naïve T cells into Th1 ( xref ), whereas Tregs formation is induced by promoting Foxp3 transcription factor expression ( xref ; xref )."
reach
"We have previously identified TAX2 peptide as an orthosteric antagonist for thrombospondin-1 (TSP-1) interaction with the cell-surface receptor CD47."
reach
"56 It would be interesting to investigate the effect of CD47 blockade on the antitumour capabilities of T cells, as previous studies have suggested that CD47 negatively regulates the differentiation of Th1 CD4 + T cells 195 and interacts with TSP-1 to inhibit T cell proliferation."
reach
"For example, B6H12 inhibits binding of TSP1 to human CD47, and TSP1 binding to CD47 inhibits NO signaling in vascular endothelial cells."
sparser
"Thus, we sought to identify an innovative selective antagonist for TSP-1:CD47 interaction."
sparser
"TSP1 binding to CD47 has global functional consequences by inhibiting endothelial nitric oxide (NO) production, controlling vascular tone, and maintaining systemic hemodynamics and cardiac dynamics in stressful conditions [ xref , xref , xref , xref ]."
reach
"The rule for TSP1 binding to CD47 is illustrated in Figure XREF_FIG."
reach
"The binding of CD47 to either SIRPalpha or TSP1 provides two anticancer strategies."
omnipath
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sparser
"The increase in capillarity may be associated by changes in the interaction between VEGF-A, TSP-1, and CD47."
sparser
"Additional studies are required to investigate the signaling mechanism of (−)-epicatechin on the VEGF-A-TSP-1-CD47 interaction as well as determine the prolonged effects upon cessation."
sparser
"TSP-1 binds CD47 to inhibit the release of interleukin (IL)-2 ."
sparser
"TSP-1 and its potential membrane receptors, e.g. alphaIIbbeta3 integrin, CD36 and CD47, concomitantly associated with the actin cytoskeleton."
sparser
"These activities are mediated, at least in part, by interactions of TSP1 with CD47 and HSPGs on T cells (this study; xref )."
sparser
"We discussed herein the interactions of TSP-1 with well-known partners such as CD36, CD47, NO, and TGF β 1."
sparser
"Conversely, the Ca1 domain does not interact with the TSP-1 receptors CD36 and CD47, excluding their involvement in the potentiation of PDGF."
sparser
"The C-terminal domain of TSP1 binds the cell surface receptors CD36 (glycoprotein IV) and CD47 (Integrin Associated Protein, IAP, or Rh-related antigen), and both receptors have anti-angiogenic effects."
sparser
"Nevertheless, some putative side-effects of using TAX2 as an anti-cancer agent still need to be explored, particularly as TSP-1 interaction with CD47 and/or CD36 is also known to modulate platelet aggregation ( xref )."
sparser
"In endothelial cells, TSP-1 can bind to CD36 and CD47 through its type-1 repeats and carboxyl-terminal domain to inhibit cell proliferation and promote anti-angiogenic events xref , xref ."
sparser
"Through its original mechanism of action which supposes concomitant disruption of TSP-1:CD47 interaction and enhancement of CD36 activation by TSP-1, TAX2 may inhibit tumor progression while limiting many of the undesired side effects of broadly inhibiting important physiological functions of CD47."
sparser
"Inhibition of TSP-1 binding to either CD36 or CD47 using peptide mimics of the binding sites was investigated next."
sparser
"This might be of utmost importance for the contributions of endothelial cell-mediated angiogenesis following TSP-1 binding to CD36 and CD47."
sparser
"We studied two peptides interacting with CD36, CSVTCG and GDGV(dI)TRIR [11,16] and 4N1-1, one of the two CD47 binding sites of TSP-1 [15] ."
sparser
"These results indicate that that TSP-1 cell surface binding to CD36 and CD47 is essential for chemotaxis enhancement, and suggest that CD36 may be the more important of the TSP-1 receptors for enhancing chemotaxis to C5a."
sparser
"Binding of CD47 to other ligands such as integrins, TSP-1 and TSP-1-derived peptides, also involves the IgV domain of CD47 [ xref ]."
sparser
"In addition, TSP-1 can also bind to different integrins, CD47 and heparan sulfated proteoglycans [ xref ]."
sparser
"Because CD47 is known to associate laterally with other signaling receptors, including VEGFR2, and TSP1 binding to CD47 inhibits VEGFR2 signaling by dissociating CD47 xref , we hypothesized that interaction of CD47 with the CD14 complex might similarly modulate signal one."
THBS1 binds THBS1 and CD47. 1 / 1
| 1
sparser
"Some studies demonstrate increased angiogenesis associated with TSP-1 overexpression (reviewed in [ xref ]), which could be due to the TSP1-dependent CD47 ligation, which may increase the motility and invasiveness of the tumor cells [ xref ]."
THBS1 binds CALR and CD47. 1 / 1
| 1
sparser
"These results unveil an autocrine mechanism of calreticulin-thrombospondin-1-CD47 interaction for the control of T cell motility and migration within three-dimensional extracellular matrix substrata."
THBS1 binds CD47 and CD47. 1 / 1
| 1
reach
"In chondrocytes, a TSP, CD47, and IAP complex may associate with alpha5beta1 integrin to modulate alterations in integrin affinity and avidity state critical in the mechanotransduction process."
THBS1 activates CD47.
8 |
THBS1 activates CD47. 8 / 8
8 |
omnipath
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WNT11 affects FZD7
1 4 | 9 13
WNT11 binds FZD7.
2 | 9 4
2 | 8 4
omnipath
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omnipath
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reach
"Direct binding of Wnt11 to Fz7 may be required to trigger this accumulation, as we found that the C-terminally truncated inactive version of Wnt11 potentially lacking the binding site to Fz is not sufficient."
reach
"Typical non canonical Wnt ligands such as WNT5A and WNT11 bind FZD7 and activate the planar cell polarity XREF_BIBR, XREF_BIBR or the Ca 2+ pathway XREF_BIBR, XREF_BIBR, shown to be involved in SCZ 46."
sparser
"Direct binding of Wnt11 to Fz7 may be required to trigger this accumulation, as we found that the C-terminally truncated inactive version of Wnt11 potentially lacking the binding site to Fz (Slb/Wnt11 tx226 ; xref ) is not sufficient."
sparser
"FN facilitated rLESC self-renewal by promoting Wnt11 and Fzd7 interaction."
sparser
"In sum, Wnt11-induced Fz7 accumulations are associated with a local increase in cell contact persistence, most likely reflecting stronger cell adhesion at these contact sites."
sparser
"We find that Fz2 but not Ryk recruits Dvl to discrete domains on the plasma membrane, similar to previously reported Wnt11–Fz7 interactions ( xref ) and consistent with our working model that Wnt5–Ryk and Wnt5–Fz lead to distinct signaling outputs."
reach
"PAPC and C-cadherin can each form separate complexes with Frizzled7 when it is bound to Wnt11, and both complexes can downregulate C-cadherin-based adhesion."
sparser
"Fz7 can bind directly to Wnt11 43 and both constitutively active and dominant negative forms of Fz7 interfere with normal convergent extension movements."
reach
"Fzd7 could be interacting with Wnt11, or another wnt ligand such as Wnt3a, Wnt6 or Wnt8c during these stages of development."
sparser
"We postulate that Wnt5b–Fz2 activates a PCP-like pathway similar to Wnt11Fz7 signaling that is directly associated with Dvl ( xref ; xref )."
sparser
"One possibility is that Wnt11-induced Fz7-accumulations interact with an adhesion molecule mediating these adhesive functions."
sparser
"One complex includes Wnt-11, Fz7, and C-cadherin (AMCC), and, in the second complex (AMCP), Wnt-11 and Fz7 associate with PAPC that is stabilized in the cell membrane via this mechanism."
WNT11 binds FZD7 and PTPRU. 1 / 1
| 1
sparser
"The atypical cadherin Flamingo (Fmi) also co-localizes with Fz7 at these sites causing increased cell-cell contact persistence due to the combined local interactions of Wnt11, Fz7 and Fmi at the contact membrane [ xref ]."
WNT11 activates FZD7.
1 2 | 9
WNT11 activates FZD7. 12 / 12
1 2 | 9
reach
"Taken together, our results suggest that PLD1 acts as a new positive mediator of Wnt and PCP signaling by promoting Wnt11 induced Fz7 endocytosis for precise regulation of Xenopus CE movements."
reach
"Moreover, Wnt11 induced Fz7-YFP accumulations in a concentration dependent manner, with increased amounts of Wnt11 enhancing both the number and size of Fz7-YFP accumulations (XREF_FIG)."
reach
"It is possible that these subcellular sites of endogenous Wnt11 and Fz7 activity modulate contact persistence of gastrulating cells, similar to the Wnt11 induced Fz7 accumulations in the animal pole assay."
reach
"51 Similarly in Xenopus, Wnt11 and Fz7 signalling activates rhoA during gastrulation 52 and Cdc42 may mediate the function of Wnt11 and Fz7 in cells undergoing convergent extension."
reach
"In sum, Wnt11 induced Fz7 accumulations are associated with a local increase in cell contact persistence, most likely reflecting stronger cell adhesion at these contact sites."
reach
"Knockdown of Xenopus Ryk results in gastrulation defects with compromised Wnt11 induced Fz7 and Dishevelled (Dvl) endocytosis."
reach
"This suggests that Wnt11 downstream signaling through RhoA and Rok is not directly involved in mediating enhancement of contact persistence by Wnt11 induced Fz7 accumulation."
reach
"Consistent with Wnt11 induced Fz7 accumulations causing increased contact persistence, we found that Fz7 accumulations shrink slower than the cell contacts (XREF_FIG)."
reach
"Collectively, our data strongly suggests that Fmi plays a key role in controlling cell adhesion at sites of Wnt11 induced Fz7 accumulation."
signor
"Consistent with this, xfz7 biochemically and functionally interacts with xwnt11"
omnipath
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THBS1 affects LRP1
1 4 | 7 9
1 4 | 5 9
reach
"Formation of the ANXA6, LRP1, and TSP1 complex was restricted to cancer associated fibroblasts (CAFs) and required physiopathologic culture conditions that improved tumor cell survival and migration."
reach
"Increased PDA aggressiveness was dependent on tumor cell mediated uptake of CAF derived ANXA6+ EVs carrying the ANXA6, LRP1, and TSP1 complex."
sparser
"In addition, the TSP1 domain of CCN2 binds to LRP1, which acts as a co-repressor of the Frizzled receptor and downregulates Wnt signaling [ xref , xref ]."
reach
"This is because TSP1, even when bound to VEGF, can bind to LRP1, increasing the number of anti-angiogenic receptor complexes, despite having a limited effect on the percentage of free or receptor bound VEGF."
reach
"Further, high affinity binding of TSP-1 to LRP likely results from the trimeric structure of TSP-1."
sparser
"Solid-phase binding assays confirmed that LRP bound to TSP1 and that the interaction was of high affinity (Kd = 5 nM)."
reach
"Although the NH 2 -terminal heparin binding domain of TSP binds LRP, and LRP mediates the endocytic degradation of TSP1 and 2, our analyses failed to demonstrate binding between LRP and the hep I sequence from the NH 2 -terminal heparin binding domain of TSP."
hprd
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reach
"This is because TSP1 binding to LRP1 leads to internalization, removing TSP1 from the tissue and influencing its availability to bind to other species."
reach
"Thus, LRP1 can bind, internalize, and degrade TSP1 through LRP1 binding to the NTD of TSP1."
reach
"For example, a pro migratory signal is generated when LRP1 binds and internalizes the complex of cell surface calreticulin and thrombospondin-1 in coronary artery endothelial cells."
reach
"These results indicate that TSP-1 binding to LRP-1 does not require prior or concomitant interaction with cell surface HSPG but suggest subsequent endocytosis requires high-affinity heparin binding."
sparser
"More importantly, the use of a system of astrocyte-neurons co-cultures indicated that astrocytes activated upon uPA/uPAR binding release thrombosponin-1 (TSP-1), and that the interaction between astrocytic TSP-1 and synaptic LRP1 promotes synaptic recovery in neurons that have suffered a hypoxic injury [ xref ]."
omnipath
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sparser
"If cell surface LRP1 is protected by an MMP/ADAM inhibitor, and TSP-1 transport to the cell surface simultaneously is stimulated by cell contact with β1 and β2 integrin ligands, TSP-1 associates heavily with LRP1 ( xref )."
sparser
"Moreover, the CRT mutations could also affect CRT binding to LRP1, thereby, disrupting the formation of the TSP1-CRT-LRP1 ternary complex for signaling the cellular activities ( xref )."
THBS1 binds CALR and LRP1. 2 / 2
| 2
sparser
"For example, a pro-migratory signal is generated when LRP1 binds and internalizes the complex of cell surface calreticulin and thrombospondin-1 in coronary artery endothelial cells ( xref , xref )."
sparser
"The N-terminal domain of TSP1 binds to the calreticulin-LRP1 receptor co-complex to signal down-regulation of cell adhesion and increased cell motility through focal adhesion disassembly."
IL1RN affects IL1R1
18 | 3
IL1RN binds IL1R1.
9 | 3
9 |
omnipath
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IL1B binds IL1R1 and IL1RN. 3 / 3
| 3
sparser
"The type I IL-1R binds IL-1α, IL-1β and the receptor antagonist IL-1Ra (reviewed in Ref. [65] )."
sparser
"In addition, IL-1R1 can be released into the extracellular space where, in its soluble form (sIL-1R1), it can also function as a soluble decoy receptor and prevent the binding of IL-1α, IL-1β, and IL-1Ra to membrane IL-1R1 ( xref )."
sparser
"On the mRNA level of MSC, we found IL1RN, which binds to IL1R on the cell surface with subsequent inhibition of the IL1beta signaling pathway, to be upregulated from a low basal level of expression upon stimulation with the PTC (318-fold) or IL1beta (107-fold) and to remain unchanged after stimulation with IL6, IL8, C3a and C5a in concentrations used in the “cocktail” ( xref )."
IL1RN inhibits IL1R1.
9 |
IL1RN inhibits IL1R1. 9 / 9
9 |
omnipath
No evidence text available
omnipath
No evidence text available
omnipath
No evidence text available
omnipath
No evidence text available
omnipath
No evidence text available
omnipath
No evidence text available
omnipath
No evidence text available
omnipath
No evidence text available
omnipath
No evidence text available
IL1B affects TLR4
3 | 10 6
IL1B binds TLR4.
| 10 6
| 9 6
sparser
"The second principal component indicates that the high expression of TLR-4 was associated with high expression of pro-inflammatory cytokines TNF-α and IL-1β ."
sparser
"Both types of glial cells release Tnf and produce the immature form of Il1b in a Tlr4-dependent manner in the presence of Hsp70."
sparser
"Although HMGB1 has been shown to stimulate pro-inflammatory cytokine production xref , xref , xref , it is unlikely that HMGB1 interacts with TLR4 to promote IL-1β production and cell death in our system."
sparser
"The four SNPs that had significant single SNP associations with either IL-1α (IL-1RAP rs6444435) or IL-1β (IL-1R2 – rs4851527 and rs4851531, IL-1RAP – rs6765375) in AA were tested for interaction effects with the two SNPs in TLR4 (rs1554973 and rs7856729) that were associated with IL-1α and IL-1β in European Americans in a previous study ( xref [pd1] )."
sparser
"Since previous reports showed that the production of IL-1β is associated with TLR2 and TLR4 pathway [ xref ], we thus speculated that the inhibitory effect of ischemic postconditioning on the IL-1β production might be correlated with inhibition of TLR2 or TLR4 pathway."
sparser
"Elevated production of IL-1β from monocytes following TLR-2, TLR-4 and TLR-7/8 stimulation was associated with reduced odds of TB recurrence."
reach
"The gram negative bacterial cell wall component LPS and IL-1beta, which bind to Toll Like Receptor 4 (TLR4) and the IL-1 Type-I receptor (IL-1RI), respectively, play a pivotal role in this process."
sparser
"The gram-negative bacterial cell wall component LPS and IL-1β, which bind to Toll-Like Receptor 4 (TLR4) and the IL-1 Type-I receptor (IL-1RI), respectively, play a pivotal role in this process."
reach
"Our results also propose that IL-1beta may bind to TLR4, in addition to its cognate receptor IL-1R1, to exert its inflammatory effects in microglia, which is a novel finding and needs to be further explored."
sparser
"Our results also propose that IL-1β may bind to TLR4, in addition to its cognate receptor IL-1R1, to exert its inflammatory effects in microglia, which is a novel finding and needs to be further explored."
reach
"The association between precancerous gastric lesions and serum pepsinogens, serum gastrin, vascular endothelial growth factor, serum interleukin-1 Beta, serum toll like receptor-4 levels and Helicobacter pylori Cag A status."
reach
"The four SNPs that had significant single SNP associations with either IL-1alpha (IL-1RAP rs6444435) or IL-1beta (IL-1R2 - rs4851527 and rs4851531, IL-1RAP - rs6765375) in AA were tested for interaction effects with the two SNPs in TLR4 (rs1554973 and rs7856729) that were associated with IL-1alpha and IL-1beta in European Americans in a previous study."
reach
"6 Binding of IL-1beta to IL-1R or LPS to TLR4 causes recruitment of adopter proteins such as MyD88, IRAK, and TRAF6 to the receptor."
reach
"The aim of this study was to investigate the association between serum pepsinogens, serum gastrin, serum vascular endothelial growth factor, serum interleukin-1 Beta, serum toll like receptor-4 levels and Helicobacter pylori Cag A status in patients with various gastric precancerous lesions."
sparser
"Functional studies revealed that this NFKBIA rs2233406 genotype was associated with elevated TLR4-mediated IL-1β production."
TLR4 binds IL1B and IL1R1. 1 / 1
| 1
sparser
"IL-1β or LPS binding to IL-1R or TLR4, respectively, results in the rapid association of the adaptor molecule Myd88 with the receptors and subsequent recruitment of the kinases IRAK1 and IRAK4. xref Activation and phosphorylation of IRAK kinases leads to the recruitment of the E3 ubiquitin ligase TRAF6 which undergoes K63-linked autoubiquitination and serves as a scaffold to recruit TAK1 and IKK kinases through binding to TAB2/3 and NEMO, respectively. xref TAK1 is subsequently activated and triggers IKK/NF-κB and mitogen-activated protein kinase/c-Jun N-terminal kinase activation. xref "
IL1B increases the amount of TLR4.
3 |
Transcriptionally active IL1B increases the amount of TLR4. 3 / 3
3 |
biopax:ctd
No evidence text available
biopax:ctd
No evidence text available
biopax:ctd
No evidence text available
LRP1 affects CALR
1 6 | 7 4
1 6 | 5 4
sparser
"It is not surprising that both calnexin and calreticulin associate with LRP because of their broad substrate specificity; the list of glycoproteins currently known to interact with calnexin and calreticulin is extensive, and no particular type of N-glycoprotein (soluble lysosomal, secreted, bound to internal or plasma membranes, etc.) is thought to be excluded [50] ."
bel
"Removal of apoptotic cells is essential for maintenance of tissue homeostasis, organogenesis, remodeling, development, and maintenance of the immune system, protection against neoplasia, and resolution of inflammation. The mechanisms of this removal involve recognition of the apoptotic cell surface and initiation of phagocytic uptake into a variety of cell types. Here we provide evidence that C1q and mannose binding lectin (MBL), a member of the collectin family of proteins, bind to apoptotic cells and stimulate ingestion of these by ligation on the phagocyte surface of the multifunctional protein, calreticulin (also known as the cC1qR), which in turn is bound to the endocytic receptor protein CD91, also known as the alpha-2-macroglobulin receptor. Use of these proteins provides another example of apoptotic cell clearance mediated by pattern recognition molecules of the innate immune system. Ingestion of the apoptotic cells through calreticulin/CD91 stimulation is further shown to involve the process of macropinocytosis, implicated as a primitive and relatively nonselective uptake mechanism for C1q- and MBL-enhanced engulfment of whole, intact apoptotic cells, as well as cell debris and foreign organisms to which these molecules may bind."
reach
"It is not surprising that both calnexin and calreticulin associate with LRP because of their broad substrate specificity; the list of glycoproteins currently known to interact with calnexin and calreticulin is extensive, and no particular type of N-glycoprotein (soluble lysosomal, secreted, bound to internal or plasma membranes, etc.) is thought to be excluded [50]."
sparser
"Furthermore, in a recent study, Yuan and colleagues applied colloidal NPs to develop a multivalent bispecific nanobioconjugate engager (mBiNE) composed of colloidal NPs conjugated with a HER2-specific antibody and a calreticulin-binding low-density lipoprotein receptor-related protein 1 (LRP1) that specifically binds the cell surface HER2 protein and pro-phagocytosis-mediating calreticulin.[ xref ] Treatment of tumor-bearing mice with mBiNE promoted receptor-targeted phagocytosis of cancer cells by macrophages and, consequently, enhanced antigen processing and presentation by APCs."
sparser
"Phagocytosis of shCD47-1 and shCD47-2 Raji cells was dependent on the calreticulin-LRP interaction as the observed phagocytosis was completely abrogated in the presence of a CRT blocking peptide ( xref )."
reach
"TSP-1 also signals through calreticulin and LRP1 complex to activate cell-survival signals in fibroblasts and to increase their migration [XREF_BIBR], and this mechanism may also contribute to pro fibrotic activities of TSP-1 during repair and remodeling processes."
reach
"Other opsonins that are known to mediate phagocytosis via MerTK are growth arrest specific protein 6 and Protein S, which bind to exposed phosphatidylserine, whereas vitronectin receptors bind to exposed phosphatidylserine via the opsonin MFG-E8, the LRP1 receptor binds to calreticulin exposed on cells, and the CR3 receptor binds to iC3b opsonized and, possibly, C1q opsonized cells."
sparser
"Macrophages can be activated by the interaction of calreticulin and LRP."
reach
"Hence, chemokines and integrin ligands up-regulate a dominant motogenic pathway through LRP1 and TSP-1 cleavage and activate an associated adhesion pathway through the LRP1 and calreticulin complex, intact TSP-1 and CD47."
omnipath
No evidence text available
omnipath
No evidence text available
omnipath
No evidence text available
omnipath
No evidence text available
omnipath
No evidence text available
omnipath
No evidence text available
sparser
"These drug-gene links are based on the binding of the LRP1 and CALR proteins to tPA in in-vitro models xref , xref and the physiological relevance of these interactions have not been established (for further discussion on the limitations of drug-gene interaction databases see below)."
THBS1 binds CALR and LRP1. 2 / 2
| 2
sparser
"For example, a pro-migratory signal is generated when LRP1 binds and internalizes the complex of cell surface calreticulin and thrombospondin-1 in coronary artery endothelial cells ( xref , xref )."
sparser
"The N-terminal domain of TSP1 binds to the calreticulin-LRP1 receptor co-complex to signal down-regulation of cell adhesion and increased cell motility through focal adhesion disassembly."
IL1B affects F3
10 | 7
IL1B increases the amount of F3.
10 |
Transcriptionally active IL1B increases the amount of F3. 10 / 10
10 |
biopax:ctd
No evidence text available
biopax:ctd
No evidence text available
biopax:ctd
No evidence text available
biopax:ctd
No evidence text available
biopax:ctd
No evidence text available
biopax:ctd
No evidence text available
biopax:ctd
No evidence text available
biopax:ctd
No evidence text available
biopax:ctd
No evidence text available
biopax:ctd
No evidence text available
IL1B binds F3.
| 7
F3 binds IL1B. 7 / 7
| 7
sparser
"Subsequent experiments revealed WIN 55,212-2 to impair the phosphorylation of p38 MAPK and JNK thereby proving an additional target of the cannabinoid in interfering with TF formation by IL-1β."
sparser
"In addition, the stimulatory effect of ceramide on basal and IL-1β-induced TF protein formation was confirmed by incubating cells with nSMase from B. cereus (Figure xref )."
sparser
"First, treatment of cells with nSMase spiroepoxide inhibitor [ xref ], which selectively inhibits the nSMase-catalyzed hydrolysis of membrane sphingomyelin to ceramide, was associated with a substantial suppression of IL-1β-induced TF formation and cellular ceramide levels."
sparser
"Whereas treatment of cells with nSMase spiroepoxide inhibitor was associated with a substantial suppression of IL-1β-induced TF formation, fumonisin B 1 and ISP-1 failed to elicit such effect (Figure xref )."
sparser
"According to Figure xref , inhibition of all kinases was associated with a partial but significant inhibition of IL-1β-induced TF formation with the most pronounced effect observed with the p38 MAPK inhibitor."
sparser
"Whereas treatment of cells with nSMase spiroepoxide inhibitor was associated with a substantial suppression of IL-1β-induced TF formation, fumonisin B 1 and ISP-1 failed to elicit such effect (Figure xref )."
sparser
"In the presence of IL-1β, however, additional treatment with AM-630 as well as the combination of AM-251 and AM-630 was associated with a further significant increase of IL-1β-induced TF protein levels (Figure xref )."
THBS1 affects SCARB2
1 | 11 4
THBS1 binds SCARB2.
1 | 4 4
1 | 4 4
sparser
"In addition, LIMP-2 can bind to TSP1 ( xref ) and TSP2 (not depicted)."
reach
"Because LIMP-2 is predominantly localized on intracellular membrane bound compartments and exhibits only low levels of cell-surface expression (Okazaki et al., 1992; Suarez-Quian, 1987), it is possible that the interaction between LIMP-2 and TSP-1 does not predominate in the physiological setting, particularly given that TSP-1 is found in the matricellular environment."
sparser
"Because LIMP-2 is predominantly localized on intracellular membrane-bound compartments and exhibits only low levels of cell-surface expression (), it is possible that the interaction between LIMP-2 and TSP-1 does not predominate in the physiological setting, particularly given that TSP-1 is found in the matricellular environment."
reach
"60 TSP1 binds to the CD36, LIMP-2, Emp sequence homology domain (AA 93-155) via its TSR, and oxLDL binds to the site (AA 155-183) next to the CD36, LIMP-2, Emp sequence homology domain."
sparser
"To test whether LIMPII also binds TSP1, a LIMPII peptide corresponding to the TSP1 binding domain of CD36 was expressed as a recombinant glutathione S-transferase (GST) fusion protein."
biogrid
No evidence text available
reach
"We recently showed that the corresponding sequence of the CD36 homolog LIMPII bound TSP1 with high affinity, confirming a functionally identical domain."
reach
"To determine the extent of TSP1 contribution to saliva inhibition of HIV infectivity, clarified saliva samples were passed over affinity columns of immobilized TSP binding LIMPII fusion protein LFP75-155 before virus preincubation."
sparser
"To demonstrate that TSP-1 peptides interacted only with CD36 fusion proteins containing the TSP-1 binding domain ( xref ), their ability to block 125 I–TSP-1 binding to immobilized CD36 and CD36–GST fusion proteins was tested (Fig. xref B )."
THBS1 activates SCARB2.
| 7
THBS1 activates SCARB2. 7 / 7
| 7
sparser
"Activation of CD36 by TSP-1 phosphorylates p38 and JNK, which results in an increased expression of FasL and apoptosis ( xref ), which we saw in our tumor cells in response to ABT-510."
sparser
"The trimeric TSP1 fragment that activates both CD148 and CD36 may be a powerful tool for anti-angiogenesis therapy."
sparser
"Through its original mechanism of action which supposes concomitant disruption of TSP-1:CD47 interaction and enhancement of CD36 activation by TSP-1, TAX2 may inhibit tumor progression while limiting many of the undesired side effects of broadly inhibiting important physiological functions of CD47."
sparser
"TSP-1 activates CD36, a transmembrane glycoprotein found on macrophages and endothelial cells [ xref , xref ]."
sparser
"Moreover, we show that activation of CD36 by TSP-1 down-modulates the VEGF receptor-2 (VEGFR-2) and p38 mitogen-associated protein kinase phosphorylation induced by VEGF-A165, and this effect was specifically abolished by point mutation at C464."
sparser
"Integrin-associated matricellular protein receptors such as CD47 and CD36 have recently been shown to be involved in pathological ROS production. xref Activation of CD47 and CD36 by thrombospondin-1 (TSP1) inhibits NO signaling xref in VSMCs and may contribute to eNOS uncoupling. xref Additionally, knockout studies of CD36 have implicated CD36 activity in the regulation of Nrf2 nuclear export and degradation, xref which ultimately results in higher levels of oxidative stress due to reduced antioxidant expression."
sparser
"Second, in higher concentrations TSP-1 binds and activates CD36, thereby decreasing intracellular cGMP-levels due to interaction with cellular uptake of myristic acid and decreased eNOS-dependent synthesis of nitric oxide [ xref ]."
CD4 affects BST2
| 12 1
| 12 1
sparser
"Additionally, we show direct binding of HIV-1 Vpu to CD4 and the recently described restriction factor CD317 (also termed Bst-2 or tetherin), which inhibits retroviral particle release from infected cells xref ."
sparser
"However, Vpu also binds the HIV cell surface receptor CD4 and the restriction factor tetherin, promoting their ubiquitination and degradation by bringing them in close proximity to the SCF β-TrCP E3 ligase complex ( xref , xref )."
sparser
"To further define the viruses’ affinity for CD4 we compared the binding of CD4-IgG 2 to cell surface-expressed envelope trimers by flow cytometry."
sparser
"This protein–protein interaction varies according to the particular viroporin analysed; for instance Viral Protein Unique (Vpu) interacts with CD4 receptor and tetherin (BST2), thereby facilitating the budding of virus particles."
sparser
"Mechanistically, tetherin blocks HIV-1 particle release and, therefore, leads to the formation of aggregated viral particles at the host cell membrane, while Vpu mediates interaction of either CD4 or BST2 to BTRC (βTrCP-1), a substrate recognition subunit of the Skp1/Cullin/F-box E3 ubiquitin ligase, leading to their ubiquitination and subsequent proteasomal degradation [ xref ]."
sparser
"Additionally, considering the importance of the structural configuration of Vpu for targeting both BST2 and its other host protein target CD4, as well as the roles of disordered regions in modulating structural orientation or affording structural plasticity that facilitates interaction with target proteins, we further examined whether these conserved hinge region residues orient Vpu in such a way that binding to BST2 and CD4 is favoured."
sparser
"Given that f-actin formation in isolated human CD4-positive lymphocytes is an important mechanism in cell polarisation during cell migration xref , xref , we next investigated the effect of GLP-1(9-36) on f-actin formation in isolated human CD4-positive lymphocytes using flow cytometry analysis."
reach
"Mechanistically, tetherin blocks HIV-1 particle release and, therefore, leads to the formation of aggregated viral particles at the host cell membrane, while Vpu mediates interaction of either CD4 or BST2 to BTRC (betaTrCP-1), a substrate recognition subunit of the Skp1/Cullin/F-box E3 ubiquitin ligase, leading to their ubiquitination and subsequent proteasomal degradation [XREF_BIBR]."
sparser
"To investigate whether our assay allows to map interacting domains within proteins, we analysed a variety of previously described Vpu mutants xref for their capacity to bind CD4 and CD317 ( xref )."
sparser
"Taken together with the BST2 binding data, the results demonstrate that the E28/L33 residues are essential for optimal binding to both BST2 and CD4."
sparser
"It remains to be elucidated whether the hinge region glutamate residue in VpuC contributes towards binding to BST2 and/or CD4, and whether it is involved as a part of an active trafficking signal."
sparser
"In recent years it has become evident that Vpu from HIV-1 is interacting with a number of host factors such as CD4, BST-2 and NTB-A (reviewed in )."
sparser
"Beside these interesting changes, the specific determinants for CD4, BST-2 and β-TrcP binding remained highly conserved ( xref ) among all the variants xref – xref , xref – xref ."
WNT11 affects RYK
| 5 6
| 5 6
sparser
"In addition, Ryk, like Fz7, interacted with the noncanonical Wnt11 and Wnt5a ( xref )."
reach
"They found Ryk genetically interacts with Wnt11 during CE movement in zebrafish."
sparser
"Ryk interacts with both Wnt11 and βarr2, cooperates with Fz7 to mediate Wnt11-stimulated endocytosis of Dsh, and signals the noncanonical Wnt pathway in CE movements."
sparser
"Ryk interacts with both Wnt11 and betaarr2, cooperates with Fz7 to mediate Wnt11-stimulated endocytosis of Dsh, and signals the noncanonical Wnt pathway in CE movements."
sparser
"However, when complexed with Fz7, Ryk binds Wnt11 and activates a beta-arrestin2 mediated pathway [ xref ]."
reach
"In addition, Ryk, like Fz7, interacted with the noncanonical Wnt11 and Wnt5a (XREF_FIG)."
reach
"Axon outgrowth requires Ca 2+ release through the IP3 receptors, whereas TRP channel mediated release is required for both outgrowth and repulsion.In Xenopus, Ryk interacts with Wnt11 and Fz7 to cause the Beta-arrestin 2 mediated endocytosis of Dsh required for convergent extension [37]."
reach
"Ryk interacts with both Wnt11 and betaarr2, cooperates with Fz7 to mediate Wnt11 stimulated endocytosis of Dsh, and signals the noncanonical Wnt pathway in CE movements."
reach
"In zebrafish, gene knockdown using morpholinos revealed a genetic interaction between Ryk and Wnt11 during the PCP pathway regulated process of embryo convergent extension."
reach
"However, when complexed with Fz7, Ryk binds Wnt11 and activates a beta-arrestin2 mediated pathway [XREF_BIBR]."
sparser
"In zebrafish, gene knockdown using morpholinos revealed a genetic interaction between Ryk and Wnt11 during the PCP pathway-regulated process of embryo convergent extension."
TIMP1 affects LRP1
1 | 1 9
1 | 1 9
reach
"The characterisation of the TIMP-1 and LRP-1 interaction could be physiologically relevant in some neurodegenerative disorders."
reach
"To gain insight into the interaction between TIMP-1 and LRP-1, we considered conformational changes that occur when a ligand binds to its receptor."
reach
"Intriguingly, although both TIMP-1 mutants bound to LRP-1, F12A and K47A mutations prevented the biological effects associated with the TIMP-1 and LRP-1 interaction."
reach
"Indeed, we and others have reported that TIMP-1 directly bound to LRP-1 at the plasma membrane of mouse cortical neurons, leading to cell morphology changes XREF_BIBR, XREF_BIBR."
sparser
"TIMP-1 complex binds to LRP with high affinity and that the binding determinant for LRP appears to reside on MMP-9."
reach
"ELISA to analyse binding of TIMP-1 to LRP-1."
reach
"Thus, proMMP-9 and TIMP-1 directly interacts with LRP-1, leading to its endocytic uptake and degradation by lysosomal proteases [XREF_BIBR]."
reach
"In this study, we combined NMA and MD simulations with biological experiments to gain insight into the TIMP-1 and LRP-1 interaction."
reach
"We have thus hypothesised that alteration of these protein dynamics could modify the TIMP-1 and LRP-1 interaction."
reach
"The data obtained using in silico simulations and biological experiments highlight the relevance of protein dynamics in the TIMP-1 and LRP-1 interaction and associated biological effects."
hprd
No evidence text available
VLDLR affects THBS1
| 4 5
| 3 5
reach
"Recently, it was also shown that thrombospondin-1 binds to Apoer2 and VLDLR in the brain where it participates in the chain migration of postnatal neurons along the rostral stream."
reach
"Thrombospondin-1 binds to ApoER2 and VLDL receptor and functions in postnatal neuronal migration."
sparser
"And the proliferation of microvascular endothelial cells can be inhibited by the interaction of TSP-1 with very low density lipoprotein receptor (VLDLR) ( xref )."
sparser
"The proliferation of HMVECs could be inhibited by the interaction of TSP1 with the very low density lipoprotein receptor (VLDLR)."
sparser
"Using adenovirus-mediated gene transfer experiments, we demonstrate that the very low density lipoprotein receptor can also bind and internalize TSP-1."
reach
"Similarly, we identified Thrombospondin-1 (THBS1), which binds to LRP8 (a.k.a. APOER2) and VLDLR receptors, also receptors for reelin, and seems to play a role in murine postnatal neuronal migration, as well as in synaptogenesis XREF_BIBR, XREF_BIBR."
reach
"In contrast to these antiangiogenic phenomena, TSP-1 may also bind ApoER2 (apolipoprotein E receptor 2) and VLDLR to promote neuronal migration."
reach
"has confirmed the interaction between the VLDLR and TSP-1."
THBS1 binds VLDLR and LRP8. 1 / 1
| 1
sparser
"Recently, it was also shown that thrombospondin-1 binds to Apoer2 and VLDLR in the brain where it participates in the chain migration of postnatal neurons along the rostral stream ( xref )."
TLR4 affects ENO1
| 5 4
| 5 4
sparser
"Further to our present results that show ENO1 binding to TLR4, it would be interesting to study the direct interaction of ENO1 TLR4 and CD14 by surface plasmon resonance technology for better understanding of ENO1 action and to highlight the specific pathways involved."
sparser
"These well-documented data led us to evaluate the binding of ENO1 to TLR4."
reach
"Further to our present results that show ENO1 binding to TLR4, it would be interesting to study the direct interaction of ENO1 TLR4 and CD14 by surface plasmon resonance technology for better understanding of ENO1 action and to highlight the specific pathways involved."
reach
"This observation suggests that citrullination does not alter ENO1 binding to TLR4 or subsequent inflammatory response, while a loss of function has been reported for other proteins such as MBP-1 in multiple sclerosis XREF_BIBR."
sparser
"In order to compare the binding of ENO1 and LPS to TLR4, we performed a competitive binding assay with ENO1 and FITC-labelled LPS using HEK-Blue hTLR4 cells."
reach
"These well documented data led us to evaluate the binding of ENO1 to TLR4."
sparser
"These results suggest that ENO1 binds TLR4 to induce a pro-inflammatory response."
sparser
"These results suggest that ENO1 binds TLR4 but not in the same manner as LPS."
reach
"These results suggest that ENO1 binds TLR4 to induce a pro inflammatory response."
IL1B affects CD44
| 2 7
IL1B increases the amount of CD44.
| 7
IL1B increases the amount of CD44. 7 / 7
| 7
reach
"Therefore, it is very likely that CD44 is related to hyaluronic acid production in human uterine cervix.Our study is the first report that IL-1beta increases the expression of CD44 mRNA in cultured human cervical fibroblasts."
reach
"IL-1beta, at concentrations from 1 to 100 pg/ml, stimulated the expression of CD44 mRNA in a dose dependent manner."
reach
"Expression of CD44 mRNA induced by interleukin-1beta in human cultured uterine cervical fibroblasts."
reach
"Role of activating protein-1 and high mobility group-I (Y) protein in the induction of CD44 gene expression by interleukin-1beta in vascular smooth muscle cells."
reach
"Northern analysis showed that IL-1beta promoted a dose- and time dependent induction of CD44 mRNA which reached 6.6-fold after 48 h, and nuclear run-on analysis showed that IL-1beta increased the rate of CD44 gene transcription within 8 h of stimulation."
reach
"Regulation of CD44 gene expression by the proinflammatory cytokine interleukin-1beta in vascular smooth muscle cells."
reach
"TG2 overexpression in MCF7 cells increased the surface expression of breast cancer stem cell marker CD44, and IL-1beta stimulation of MCF7_TG2 breast cancer cells further increased CD44 expression (Additional file 1 : Figure S3)."
IL1B binds CD44.
| 2
| 2
sparser
"Despite lack of increased expression of CD44, or expression of novel splice variants, we have demonstrated increased binding of exogenous fl-HA by CD44 following stimulation with either IL-1β or 25mM -glucose."
sparser
"Furthermore, blunted crystal phagocytosis was associated with attenuated induction of IL-1β expression and production by CD44 deficient macrophages."
THBS1 affects ITGB3
2 2 4 |
THBS1 binds ITGB3.
2 2 2 |
2 1 2 |
omnipath
No evidence text available
omnipath
No evidence text available
biogrid
No evidence text available
biogrid
No evidence text available
hprd
No evidence text available
1 |
hprd
No evidence text available
THBS1 activates ITGB3.
2 |
THBS1 activates ITGB3. 2 / 2
2 |
omnipath
No evidence text available
omnipath
No evidence text available
THBS1 affects LRP8
| 2 5
| 1 5
reach
"In contrast to these antiangiogenic phenomena, TSP-1 may also bind ApoER2 (apolipoprotein E receptor 2) and VLDLR to promote neuronal migration."
reach
"Similarly, we identified Thrombospondin-1 (THBS1), which binds to LRP8 (a.k.a. APOER2) and VLDLR receptors, also receptors for reelin, and seems to play a role in murine postnatal neuronal migration, as well as in synaptogenesis XREF_BIBR, XREF_BIBR."
reach
"Recently, it was also shown that thrombospondin-1 binds to Apoer2 and VLDLR in the brain where it participates in the chain migration of postnatal neurons along the rostral stream."
reach
"Blake et al reported that TSP-1 promoted neural cell migration by binding to ApoER2 in postnatal neuronal migration [XREF_BIBR]."
sparser
"Similarly, we identified Thrombospondin-1 ( THBS1 ), which binds to LRP8 (a."
reach
"Thrombospondin-1 binds to ApoER2 and VLDL receptor and functions in postnatal neuronal migration."
THBS1 binds VLDLR and LRP8. 1 / 1
| 1
sparser
"Recently, it was also shown that thrombospondin-1 binds to Apoer2 and VLDLR in the brain where it participates in the chain migration of postnatal neurons along the rostral stream ( xref )."
IL1B affects CD4
| 3 4
IL1B binds CD4.
| 3 1
| 3 1
sparser
"Factors released from the interaction between IL-1β-competent myeloid cells and CD4 + T cells are highly toxic to neurons."
sparser
"In xref and xref , it seems likely that IL-1β–expressing cells were associated with CD4 + cells, suggesting that the CD4 + cells might be involved, within the wall of the aneurysm, in activating IL-1β production in the dispersed macrophages and that, in turn, these cells might be activating the CD4 + cells, possibly through the presentation of autoantigens."
reach
"For Th17 polarizing conditions, CD4 + T cells were stimulated with plate bound anti-CD3 antibody (0.5 mug/ml) and anti-CD28 antibody (1 mug/ml) (BD Pharmingen), anti-IFN-gamma (2 mug/ml), anti-IL-4 (2 mug/ml), IL-1beta (20 ng/ml), and IL-6 (20 ng/ml) (R&D systems) for 72 h. Fn14-Fc was purchased from R&D systems."
sparser
"Therefore, mPGES-1 stimulates an intercellular interaction between CD4 + T cells by upregulating the autocrine function of IL-1β in activated CD4 + T cells, which release IL-17 to facilitate axonal and myelin damage in EAE mice."
IL1B increases the amount of CD4.
| 3
IL1B increases the amount of CD4. 3 / 3
| 3
reach
"This down-regulation of CD4 expression by LPS, TNF-alpha, and IL-1 beta occurs at the level of transcription."
reach
"Conversely, neither LPS nor TNF-alpha and IL-1 beta were able to modulate surface CD4 expression on quiescent or phytohaemagglutinin (PHA)-activated lymphocytes."
reach
"However, after 24h, IL-1beta significantly increased surface expression of the positive CD4 + T-cell co-stimulatory molecule, ICOS-L 57."
TIMP1 affects NR3C2
| 5
TIMP1 binds NR3C2.
| 3
| 3
sparser
"We found that the N-terminal 22 000 Mr fragment is capable of binding to TIMP in a similar manner to the whole molecule resulting in the formation of a TIMP- 22 000 Mr fragment complex."
sparser
"The data additionally shows that the C-terminal 27000 Mr domain will not bind to TIMP on its own suggesting that the TIMP-binding ability of collagenase resides mainly or entirely in the N-terminal domain."
sparser
"Intact fibroblasts cultured in the presence of tunicamycin synthesized an Mr 20 000 form of tissue inhibitor of metalloproteinases, detectable intracellularly and extracellularly."
TIMP1 inhibits NR3C2.
| 2
TIMP1 inhibits NR3C2. 2 / 2
| 2
sparser
"In contrast to our own initial data they also reported inhibition of both whole molecule collagenase and 22 000 Mr fragment by TIMP at a 1:1 molar stoichiometry."
sparser
"Nagase et al. [8] have also described the inhibition of the 22 000 Mr fragment by TIMP; however they report that inhibition occurs at a 1:1 molar ratio of TIMP to 22000 Mr fragment and they do not mention any attenuation of inhibition compared to that of the whole molecule."
TIMP1 affects CD44
| 4 1
| 4 1
reach
"Previous studies have demonstrated that TIMP-1 binds a proMMP9 and CD44 complex that facilitates erythroid cell survival and is localized to the cell surface [XREF_BIBR]."
sparser
"Interestingly, CD44 also correlates with increased aggressiveness and resistance to radiation therapy and chemotherapeutics (reviewed in xref ) and TIMP-1 binding of the proMMP-9/CD44 complex has been shown to mediate cell survival through Akt activation xref ."
sparser
"Importantly, we uncover that TIMP1 suppresses osteoblast growth and differentiation by targeting the AKT pathway, and this is associated with TIMP1-mediated induction of PTEN via its binding to the cell surface receptor CD44."
sparser
"Other studies have also reported that TIMP-1 can bind to CD63 or the pro-MMP9/CD44 complex, thereby activating survival pathways in some cells [ xref , xref ]."
sparser
"Therefore, our results indicate that the anti-apoptotic signalling of TIMP-1 depends on the formation of a ternary complex between TIMP-1, proMMP-9 and CD44 at the UT-7 erythroid cell surface."
THBS1 affects ITGB1
1 4 |
THBS1 binds ITGB1.
1 2 |
1 2 |
hprd
No evidence text available
omnipath
No evidence text available
omnipath
No evidence text available
THBS1 activates ITGB1.
2 |
THBS1 activates ITGB1. 2 / 2
2 |
omnipath
No evidence text available
omnipath
No evidence text available
PTGER3 affects IL1B
| 5
| 5
sparser
"Clinically, high-gingival crevicular fluid levels of PGE-2, IL-1β, or IL-6 have been associated with their elevated levels in amniotic fluid.[ xref ] The inflammatory response appears to be the privileged pathway of the pathogenic periodontal disease influence on pregnancy, as suggested for other major systemic diseases, including cardiovascular diseases or diabetes.[ xref ]"
sparser
"Increased levels of IL-1beta and PGE(2) were associated with body mass index >or=30 kg/m(2)."
sparser
"IL-6 did increase IL-1beta-induced PGE(2) formation in unstimulated cells but not in cells stimulated with arachidonic acid (AA; 10(-5) M), suggesting that IL-6 effects were mediated at the level of AA release."
sparser
"The close parallel between the kinetics of COX-2 expression and PGE synthesis indicated that IL-1β-induced PGE formation in TSMCs is mediated through the enhanced expression of COX-2."
sparser
"Higher levels of GCF IL-1beta and PGE(2) were significantly associated with clinical signs of periodontal disease and independently related to patient-based anthropomorphic measures, behaviours and exposures in community-dwelling adults."
IL1B affects TRPC3
| 1 4
IL1B increases the amount of TRPC3.
| 4
IL1B increases the amount of TRPC3. 4 / 4
| 4
reach
"Interleukin-1beta specifically upregulated TRPC3 protein expression in myometrial cells without influencing TRPC3 mRNA and had no effect of TRPC4 mRNA or protein [XREF_BIBR]."
reach
"IL-1 beta did not alter TrpC1, 3, 4, 6, or 7 mRNA expression; but IL-1 beta exclusively up-regulated TrpC3 protein expression (P < or = 0.05)."
reach
"Specifically, IL1B modulates protein expression of TRPC3 (a putative calcium channel) and SR Ca 2+ -ATPases, initiates spontaneous [Ca 2+] i oscillations and augments calcium influx pathways and a store operated current [XREF_BIBR, XREF_BIBR]."
reach
"The induction of TRPC3 protein expression by IL1B may in part explain the increase in TRPC3 expression observed in uterine muscle at labour onset and provides a plausible mechanism by which cytokines could induce premature labour."
IL1B binds TRPC3.
| 1
| 1
sparser
"An increased TRPC3 expression was significantly associated with increased expression IL-1β or TNF-α."
IL1B affects ANTXR1
| 5
| 5
sparser
"IL-1α and IL-1β bind to the IL-1 receptor 1 (IL-1R1) [ xref , xref ]."
sparser
"IL-1α and IL-1β both bind to the IL-1 receptor 1 (IL-1RI), which is present on almost all cell types, including structural cells such as airway epithelial cells [ xref , xref ]."
sparser
"Both IL-1α and IL-1β bind to IL-1 receptor 1 (IL-1R1)."
sparser
"IL-1 signaling is activated when either of the agonistic IL-1 ligands i.e. IL-1α or IL-1β binds to the IL-1 receptor 1 (IL-1R1) which then forms a complex with the IL-1 receptor accessory protein (IL-1RAcP)."
sparser
"Both IL-1α and IL-1β interact with the IL-1 receptor 1 (IL-1R1) and recruit the IL-1 receptor accessory protein (IL-1R3, formerly IL-1RAcP) to induce a downstream signal via several inflammatory kinases, such as Myd88, ERK, JNK and NFκB, leading to transcription of inflammatory, catabolic genes [ xref - xref ]."
CCL4 affects PTK2B
| 1 1 3
CCL4 phosphorylates PTK2B. 5 / 5
| 1 1 3
sparser
"Furthermore, CCL5 and CCL4 can induce the phosphorylation of Pyk2 in the human T cell line, DU6 [80] and Pyk2 activation by CCL4 has been shown to be dependent on CCR5 activation [81] ."
reach
"RANTES and SDF-1alpha, but not MIP-1beta, rapidly induced Pyk2 phosphorylation in HL60 cells."
trips
"Pyk2 phosphorylation was also induced by macrophage inflammatory protein-1beta (MIP-1beta) and stromal cell-derived factor-1alpha, chemokine ligands for CCR5 and CXCR4."
reach
"Furthermore, CCL5 and CCL4 can induce the phosphorylation of Pyk2 in the human T cell line, DU6 [80] and Pyk2 activation by CCL4 has been shown to be dependent on CCR5 activation [81]."
reach
"Indeed, MIP-1beta, as well as RANTES and SDF-1alpha, induced Pyk2 phosphorylation in DU6 cells with kinetics comparable to those in HL60 cells."
ATP1A1 affects TRPV1
| 5
ATP1A1 activates TRPV1.
| 4
ATP1A1 activates TRPV1. 4 / 4
| 4
sparser
"We observed that NA directly and potently activates TRPV1 from the intracellular side by lowering the activation threshold for heat, causing channel activation at physiological body temperature."
sparser
"In a recent study xref , we found that NA activates the capsaicin receptor TRPV1, a heat-activated polymodal cellular sensor that mediates the flushing response upon consumption of spicy food xref xref ."
sparser
"Our observation of NA-induced TRPV1 activation raises the question whether these TRPV1 homologs can also be targeted by NA."
sparser
"Our reported study showed that NA directly and strongly activates TRPV1 from the intracellular side xref ."
ATP1A1 inhibits TRPV1.
| 1
ATP1A1 inhibits TRPV1. 1 / 1
| 1
sparser
"NA inhibits TRPV1 channels activated by capsaicin in sensory neurons."
WNT11 affects ROR2
| 1 3
| 1 3
reach
"Ror2 physically interacts with Wnt11."
reach
"Binding of Wnt4, Wnt5a or Wnt11 to Fz and non canonical Fz co-receptors such as RYK, and ROR2, activates the Rho and Rac GTPases, leading to cytoskeletal modifications."
reach
"Wnt5a and Wnt11 binding to FZD and/or RoR2 also can lead to intracellular Ca 2+ release, which activates Ca 2+ / calmodulin dependent kinase II (CaMKII) and protein kinase C (PKC) 32."
sparser
"Ror2 physically interacts with Wnt11."
WNT11 affects FZD3
4 |
WNT11 binds FZD3.
2 |
2 |
signor
"Wnt proteins bind to the frizzled receptors and lrp5/6 co-receptors, and through stabilizing the critical mediator betBeta-catenin, initiate a complex signaling cascade that plays an important role in regulating cell proliferation and differentiation."
signor
"Human wnt5a, wnt5b and wnt11 are non-canonical wnt ligands transducing pcp signals through fzd3 or fzd6 receptors."
WNT11 activates FZD3.
2 |
WNT11 activates FZD3. 2 / 2
2 |
signor
"Human wnt5a, wnt5b and wnt11 are non-canonical wnt ligands transducing pcp signals through fzd3 or fzd6 receptors."
signor
"Wnt proteins bind to the frizzled receptors and lrp5/6 co-receptors, and through stabilizing the critical mediator betBeta-catenin, initiate a complex signaling cascade that plays an important role in regulating cell proliferation and differentiation."
THBS1 affects CD44
| 3 1
| 3 1
sparser
"We believe that TSP-1 bridges cell surface receptors and facilitates (i.e., accelerates) formation of the DBP binding site complex, but there is no evidence that TSP-1 directly interacts with either CD44 or annexin A2, two molecules that we have previously shown are part of the DBP binding site ( xref )."
sparser
"TSP-1 interacts with CD44 ligands or HA binding proteins to influence CD44 expression [ xref ]."
sparser
"These studies indicate a clear connection between the two molecules, and since both CD44 and TSP-1 bind multiple ligands there is a distinct possibility that one or more of these ligands could bridge TSP-1 with CD44, thus, facilitating the DBP binding site complex."
reach
"However, there are indirect associations between CD44 and TSP-1 that may be relevant to understanding how TSP-1 assists DBP in enhancing chemotaxis to C5a."
M6PR affects CTSD
| 4
| 3
sparser
"In the latter study, the authors demonstrated an interaction between M6PR and pCathD."
sparser
"Cathepsin D binds to the monocyte/macrophage mannose-6-phosphate receptor [44,45,69], which determines the sorting of cathepsin D between intracellular and plasma membrane components."
sparser
"Both treatments resulted in suppression of cellular proliferation and the induction of a cell death with no detectable caspase-3 activation or DNA fragmentation, however, it was associated with increased accumulation of cathepsin D, cellular vaculolization, expression of the mannose-6-phosphate receptor, and the autophagy marker LC3-II, all of which are believed to be associated with autophagy."
SORT1 binds CTSD and M6PR. 1 / 1
| 1
sparser
"Cathepsin H has previously been demonstrated to interact with sortilin, while cathepsin D interacts with both sortilin and the M6PR."
LGALS3BP affects ITGB1
1 1 2 |
1 1 2 |
omnipath
No evidence text available
omnipath
No evidence text available
biogrid
No evidence text available
hprd
No evidence text available
KCNH2 affects CALR
1 | 2 1
1 | 2 1
sparser
"As shown in xref , treatment with lactacystin or ALLN but not leupeptin (a lysosome inhibitor) results in an increase in the levels of core-glycosylated, immature form of hERG, Calnexin and Calreticulin."
sparser
"Furthermore, the interaction between mutant hERG proteins and chaperone proteins, Calnexin and Calreticulin, play crucial roles in these processes."
reach
"To assess the physical interaction between hERG and Calnexin and Calreticulin, immunoprecipitation was done with anti-Calnexin or anti-Calreticulin antibody, followed by Western blot analysis with anti-hERG antibody."
biogrid
No evidence text available
ITGAV affects CALR
1 3 |
1 3 |
omnipath
No evidence text available
omnipath
No evidence text available
omnipath
No evidence text available
hprd
No evidence text available
IL1B affects TRPV4
4 |
Transcriptionally active IL1B increases the amount of TRPV4. 4 / 4
4 |
biopax:ctd
No evidence text available
biopax:ctd
No evidence text available
biopax:ctd
No evidence text available
biopax:ctd
No evidence text available
IL1B affects PDGFRA
| 2 2
IL1B phosphorylates PDGFRA.
| 2
IL1B phosphorylates PDGFRA. 2 / 2
| 2
sparser
"IL-1beta-stimulated c-Src, PDGFR, and Akt phosphorylation and proMMP-9 expression were attenuated by the inhibitors of c-Src (PP1), PDGFR (AG1296), and PI3K (LY294002), respectively, or transfection with dominant negative plasmid of c-Src or short hairpin RNAs of PDGFR and Akt."
sparser
"Src, PDGFR, and PI3K/Akt mediated the effects of IL-1beta because pretreatment with PP1, AG1296, and wortmannin also abrogated IL-1beta-stimulated Src, PDGFR, and Akt phosphorylation, respectively."
IL1B increases the amount of PDGFRA.
| 2
IL1B increases the amount of PDGFRA. 2 / 2
| 2
reach
"Collectively, these findings support the notion that C/EBPdelta mediated increase in PDGFR-alpha expression by IL-1beta is involved in smooth muscle cell hyperplasia by partial deletion of XBP1."
reach
"Active CREB prevents activation of PDGFRalpha promoter-luciferase reporter activity by CCAAT and enhancer binding protein-delta (C/EBPdelta), shown to mediate IL-1beta stimulation of PDGFRalpha expression."
IL1B affects HRH1
| 4
IL1B binds HRH1.
| 2
| 2
sparser
"The same signalling pathway is involved in the interactions between histamine, interleukin-1beta, and interleukin-6, where NGF secretion is amplified."
sparser
"In this review, the biochemical mechanisms of histamine-stimulated NGF synthesis and secretion, and interactions between histamine, interleukin-1beta, and interleukin-6 are discussed."
IL1B activates HRH1.
| 2
IL1B activates HRH1. 2 / 2
| 2
sparser
"Moreover, an experimental study of central administration of interleukin-1β in rats demonstrated that interleukin-1β may stimulate synthesis and release of hypothalamic histamine at presynaptic terminals by activation of histidine decarboxylase (a histamine-synthesizing enzyme) and thus facilitate the degradation of extracellular histamine by the activation of histamine-N-methyltransferase (a degrading enzyme). xref These results indicate that interleukin-1β activates neural histamine turnover in the hypothalamus."
sparser
"Moreover, interleukin-1beta may activate the turnover of hypothalamic neural histamine."
IL1B affects CNR1
| 4
IL1B increases the amount of CNR1. 4 / 4
| 4
reach
"Next, we examined a possibility that the male specific upregulation of CB1 expression by IL-1beta can be mediated by the differential expression of AR in TG between the two sexes."
reach
"Interleukin-1 beta (IL-1beta), a proinflammatory cytokine, upregulated CB1 mRNA expression in TG of male rats."
reach
"In this study, however, we demonstrated that the IL-1beta induction of CB1 expression was prevented only in the presence of flutamide, but not ICI 182,780."
reach
"In this study, we confirmed that IL-1beta application reliably and significantly increases CB1 expression in TG primary cultures prepared from intact male rats (XREF_FIG)."
IL1B affects ABCA1
4 |
Transcriptionally active IL1B decreases the amount of ABCA1. 4 / 4
4 |
biopax:ctd
No evidence text available
biopax:ctd
No evidence text available
biopax:ctd
No evidence text available
biopax:ctd
No evidence text available
IGF2R affects CTSD
1 | 2 1
1 | 2 1
hprd
No evidence text available
reach
"As shown in XREF_SUPPLEMENTARY, 86% of the Ctsk activity and 16% of the Ctsd activity from WT lysates bound the CI-MPR column."
sparser
"Newly synthesized CTSD binds CI-M6PR in the TGN and is subsequently translocated into endosomes (Figure xref )."
sparser
"Interestingly, when analyzing the cathepsins' interaction with the CI-MPR, the authors observed that, unlike cathepsin H, which bound exclusively to sortilin, cathepsin D was also able to bind to the CI-MPR."
ENO1 affects CD47
| 2 2
| 2 2
sparser
"The interaction between CD47 and ENO1 was verified by co-immunoprecipitation (co-IP)."
sparser
"Our mechanistic investigations demonstrated that CD47 interacted with ENO1 and protected it from ubiquitin-mediated degradation, subsequently promoting glycolytic activity and phosphorylation of ERK in CRC cells."
reach
"Our mechanistic investigations demonstrated that CD47 interacted with ENO1 and protected it from ubiquitin mediated degradation, subsequently promoting glycolytic activity and phosphorylation of ERK in CRC cells."
reach
"The interaction between CD47 and ENO1 was verified by co-immunoprecipitation (co-IP)."
CD47 affects CALR
| 3 1
| 2 1
sparser
"Abnormalities in the PI3K/Akt signaling pathway deregulation of C/EBP-α and its partner PPAR-γ , and the interaction between calreticulin (CRT) and CD47 are also promising therapeutic targets."
sparser
"In DMM, calreticulin expression was not statistically associated with CD47 expression levels ( xref )."
reach
"Abnormalities in the PI3K and Akt signaling pathway deregulation of C/EBP-alpha and its partner PPAR-gamma, and the interaction between calreticulin (CRT) and CD47 are also promising therapeutic targets."
THBS1 binds CALR and CD47. 1 / 1
| 1
sparser
"These results unveil an autocrine mechanism of calreticulin-thrombospondin-1-CD47 interaction for the control of T cell motility and migration within three-dimensional extracellular matrix substrata."
WNT11 affects PTPRU
| 2 1
| 1 1
sparser
"Previous work showed a functional interaction between Fmi and Wnt11 in controlling convergent extension movements during zebrafish gastrulation ( xref )."
reach
"Previous work showed a functional interaction between Fmi and Wnt11 in controlling convergent extension movements during zebrafish gastrulation."
WNT11 binds FZD7 and PTPRU. 1 / 1
| 1
sparser
"The atypical cadherin Flamingo (Fmi) also co-localizes with Fz7 at these sites causing increased cell-cell contact persistence due to the combined local interactions of Wnt11, Fz7 and Fmi at the contact membrane [ xref ]."
WNT11 affects LRP6
2 | 1
WNT11 binds LRP6.
1 | 1
1 | 1
signor
"Wnt proteins bind to the frizzled receptors and lrp5/6 co-receptors, and through stabilizing the critical mediator betBeta-catenin, initiate a complex signaling cascade that plays an important role in regulating cell proliferation and differentiation."
sparser
"Wnt11 is associated with the canonical Wnt receptor LRP6 to activate the β-catenin pathway."
WNT11 activates LRP6.
1 |
WNT11 activates LRP6. 1 / 1
1 |
signor
"Wnt proteins bind to the frizzled receptors and lrp5/6 co-receptors, and through stabilizing the critical mediator betBeta-catenin, initiate a complex signaling cascade that plays an important role in regulating cell proliferation and differentiation."
TIMP1 affects PTGER3
| 3
| 3
sparser
"Inhibition of PGE 2 production by both EPA and DHA has been reported; however, formation of PGE 3 by EPA with human lung cancer cells has not been clearly demonstrated previously due to the lack of an adequate analytical method."
sparser
"Concomitant with the reduction of PGE 2 , incubation with EPA (100 μM) significantly increased PGE 3 formation from 0.43±0.15 ng/5 million cells in control cells to 5.12±1.05 ng/5 million cells in treated cells ( p <0.001) ( Fig. 8 )."
sparser
"These data suggest again that the lack of antiproliferative activity of EPA in H1299 cells may be associated with the relative lack of formation of PGE 3 due to a lower level of COX-2 expression."
THBS1 affects SDC4
| 1 2
| 1 2
reach
"There are indications that binding of TSP-1 to syndecan-4 proteoglycan mediates tubulogenesis and their protection from apoptosis [XREF_BIBR]."
sparser
"There are indications that binding of TSP-1 to syndecan-4 proteoglycan mediates tubulogenesis and their protection from apoptosis [ xref ]."
reach
"However, by binding to syndecan-4, TSP-1 can also exert pro angiogenic effects, protecting ECs from apoptosis and stimulating tubulogenesis [XREF_BIBR]."
THBS1 affects CD4
| 1 2
| 1 2
reach
"Given the lack of empirical data and the complexity of the signaling processes, we set out here to interrogate potential mechanisms for the inhibition of VEGF and VEGFR2 signaling to ERK1/2 and calcium by TSP1 and CD4 interaction utilizing a detailed rule based model of VEGF signaling to ERK1/2 and calcium incorporating VEGFR2, the co-receptor NRP1, and the detailed dynamics of the receptors."
reach
"Additionally, TSP-1 binds CD4 to block HIV entry into target cells."
sparser
"Additionally, TSP-1 binds CD4 to block HIV entry into target cells ( xref )."
SORT1 affects CTSD
| 1 2
| 2
reach
"In mammals, cathepsin D (aspartyl protease), prosaposin C and acid sphingomyelinase can also interact with their receptor sortilin via stretches of amino acids."
reach
"Cathepsin H has previously been demonstrated to interact with sortilin, while cathepsin D interacts with both sortilin and the M6PR."
SORT1 binds CTSD and M6PR. 1 / 1
| 1
sparser
"Cathepsin H has previously been demonstrated to interact with sortilin, while cathepsin D interacts with both sortilin and the M6PR."
PLAUR affects ENO1
| 2 1
| 2 1
sparser
"To directly examine the ability of these molecules to interact, we performed a cell-free dot blotting assay and found that ENO1, uPA, and uPAR interact with each other, while plasminogen only interacts with ENO1 ( xref )."
sparser
"ENO1 was able to interact with uPA, and uPAR; resulting in augmentation of cell migration and invasion."
reach
"In this study, we demonstrated that surface ENO1 interacted with plasminogen, uPA and uPAR on the PE089 and LLC and luc lung cancer cell lines."
NOTCH1 affects CCL4
| 1 2
| 1 2
sparser
"In this Notch signaling process, the cleaved LIN-12/Notch intracellular domain (NICD) binds to the LAG-1/CSL transcriptional repressor, forming a transcriptional activator complex containing LAG-1 and NICD."
reach
"NICD subsequently migrates into the nucleus and binds to the transcription factor CBF-1 and RBP-J, Su (H), Lag-1 (CSL), which in Drosophila melanogaster is known as Suppressor of Hairless, or Su (H) (see also XREF_FIG)."
reach
"In the nucleus, NICD interacts with LAG-1 and LAG-3 (a homolog of mastermind transcriptional co-activators) to activate the expression of Notch target genes (XREF_FIG A)."
IL1B affects ITGB8
| 3
IL1B increases the amount of ITGB8. 3 / 3
| 3
reach
"Here we report the mechanism of increased ITGB8 expression by IL-1beta."
reach
"IL-1beta activates Itgb8 expression by chromatin remodeling and exposure of binding sites for additional transcription factors, and the expression of Itgb8 in different cell types corresponds with the chromatin state of the Itgb8 core promoter."
reach
"We have previously shown that the proinflammatory cytokine interleukin-1beta (IL-1beta) increases ITGB8 expression on lung fibroblasts, which increases alphavbeta8 mediated TGF-beta activation in fibrosis and pathologic inflammation."
IL1B affects IFNGR1
3 |
Transcriptionally active IL1B increases the amount of IFNGR1. 3 / 3
3 |
biopax:ctd
No evidence text available
biopax:ctd
No evidence text available
biopax:ctd
No evidence text available
HLA-A affects DERL1
2 1 |
2 1 |
biogrid
No evidence text available
biogrid
No evidence text available
hprd
No evidence text available
CXCR4 affects CXCL16
| 2 1
| 2 1
sparser
"CXCR4 and CXCL16 expressions were closely associated with overall survival in Kaplan-Meier analysis ( χ 2 = 4.67, P < 0.05; χ 2 = 4.48, P < 0.05)."
reach
"CXCR4, CXCR5 and CXCR6 bind their respective homeostatic chemokine ligands, SDF-1 and CXCL12, BCA-1 and CXCL13 and CXCL16."
sparser
"Kaplan-Meier analysis revealed that patients with high CXCR6 expression had significantly lower OS than did those with low CXCR6 expression ( P = 0.049), whereas the level of CXCL12, CXCR4, and CXCL16 expression was not associated with the OS of cervical cancer patients ( xref )."
WNT11 affects RET
| 2
| 2
reach
"Consistent with the idea that reciprocal interaction between Wnt11 and Ret and Gdnf regulates the branching process, Wnt11 and Ret mutations synergistically interact in ureteric branching morphogenesis."
reach
"The Wnt family member Wnt11 is specifically expressed in the UB tips at all stages of ureteric development (XREF_FIG) and reciprocal interaction between Wnt11 and Gdnf and Ret regulates UB branching."
VDAC1 affects ATP1A1
2 |
2 |
biogrid
No evidence text available
biogrid
No evidence text available
TRPA1 affects IL1B
| 1 1
| 1 1
reach
"In addition to the mechanisms described above, a more direct interaction between TRPA1 and IL-1beta in MSU crystal induced inflammation is possible, as TRPA1 activation has been reported to enhance IL-1beta production in keratinocytes [XREF_BIBR], and a similar effect was found in the present study in the air-pouch model."
sparser
"In addition to the mechanisms described above, a more direct interaction between TRPA1 and IL-1β in MSU crystal-induced inflammation is possible, as TRPA1 activation has been reported to enhance IL-1β production in keratinocytes [ xref ], and a similar effect was found in the present study in the air-pouch model."
TNFRSF1A affects IL1RN
| 2
sparser
"Several investigators also found increases in sTNFR1 in the serum of SZ patients. xref reported association of TNFR1 and IL-1RA with general severity of psychotic symptoms in SZ."
sparser
"Hope et al. (2013) reported association of TNFR1 and IL-1RA with general severity of psychotic symptoms in SZ."
TLR4 affects BST2
| 2
| 2
sparser
"This decrease in TLR4 mRNA was associated with decreased surface expression of TLR4/MD2 complex, measured by flow cytometry (66 ± 14%, n=4, p <0.03) ( xref )."
sparser
"This study was aimed to assess the effects of BUD, ACL and FO in bronchial epithelial cells exposed to cigarette smoke extract (CSE) by evaluating: a) Expression of TLR4 and survivin and LPS binding by flow cytometry; b) expression of HDAC2, HDAC3, SIRT1 and FoxO3 and activation of the ERK 1/2 pathway by western blot; c) IL-8 mRNA levels and release by Real Time-PCR and ELISA, respectively."
TIMP1 affects F3
| 2
| 2
reach
"Besides, an association between TIMP-1 and APACHE-II (rho = 0.33; P = 0.001), TF (rho = 0.43; P < 0.001), and TNF-alpha (rho = 0.43; P < 0.001) was found in our study."
reach
"We found an association between TIMP-1 and APACHE-II (rho = 0.33; P = 0.001), TF (rho = 0.43; P < 0.001) and TNF-alpha (rho = 0.43; P < 0.001) (XREF_TABLE)."
THBS1 affects ITGAV
1 1 |
1 |
biogrid
No evidence text available
1 |
hprd
No evidence text available
THBS1 affects F3
| 2
| 2
sparser
"However, further studies are required to determine whether TIPE2 participates in the pathogenesis of asthma by interacting with the coagulation substances TF and TSP-1."
sparser
"The results of the current study indicated that anti-inflammatory TIPE2 levels are associated with levels of the coagulation substances TF and TSP-1."
RNF149 affects ACVR1
2 |
2 |
biogrid
No evidence text available
biogrid
No evidence text available
PTGER4 affects IL1B
| 2
| 2
reach
"Furthermore, IL-1 beta can interact with NO and PGE2 during steroid genesis [XREF_BIBR]."
reach
"Following the above concept, we have at- tempted to characterize in vitro the interactions between IL-1B, IL-6, TNF-ot, LTB4 and PGE2, the major pro in- flammatory cytokines and eicosanoids of hp-Mth."
PTCH1 affects HLA-A
2 |
2 |
biogrid
No evidence text available
biogrid
No evidence text available
NR3C2 affects BST2
| 2
| 2
sparser
"Proc Natl Acad Sci, US 73, 2881-2886 46 Darzynkiewicz Z, Traganos F, Staiano- Coico I,, Kapuscin- ski J, Melamed MR (1982) Interactions of rhodamine 123 with living cells studied by flow cytometry."
sparser
"Cytometry 1, 98-108 30 Darzynkievicz Z, Traganos F, Staiano-Coico L, Kapunscin- ski J, Melamed MR (1982) Interactions of rhodamine 123 with living cells studied by flow cytometry."
NPC1 affects LAMP2
| 2
| 2
sparser
"In future work, it will be important to elucidate precisely how LAMP2 interacts with both NPC2 and NPC1 to facilitate cholesterol export from lysosomes and how cholesterol binding contributes to LAMP2’s other cellular roles."
sparser
"The authors now report that binding of purified LAMP2 and NPC1 N-term domain proteins is not affected by the presence or absence of cholesterol, though co-IP of the full length proteins from cells is diminished when cells are incubated with cyclodextrin."
NPC1 affects CTSD
| 1 1
| 1
reach
"It has been recently shown that aspartyl cathepsin CtsD most likely indirectly binds to NPC1 and that NPC1 could modulate CtsD levels and processing [XREF_BIBR]."
CTSD binds ABCA1 and NPC1. 1 / 1
| 1
sparser
"First, CYCLO stimulated lysosomal proteolytic activity by increasing cathepsin D activity, levels of cathepsins B and D and two proteins known to interact with cathepsin D, NPC1 and ABCA1."
KRT1 affects CTSD
| 1 1
| 1 1
sparser
"In the MB-435-based network 2 ( xref ), the involvement of the TNFα/TGFβ signaling axis is associated with RPSA, GLO1, and CTSD interactions with TNF as well as CTSD and KRT1 interactions with TGFB1."
reach
"In the MB-435-based network 2 (XREF_FIG), the involvement of the TNFalpha and TGFbeta signaling axis is associated with RPSA, GLO1, and CTSD interactions with TNF as well as CTSD and KRT1 interactions with TGFB1."
JMJD6 affects CALR
| 2
| 2
sparser
"The cytoplasmic calreticulin binds to phosphatidylserine in the inner leaflet of the plasma membrane from where it is externalized as the plasma membrane loses its asymmetry."
sparser
"The second suggested pathway, relevant to apoptotic cells, involves the binding of cytosolic calreticulin to phosphatidylserine on the inner leaflet of the plasma membrane prior to apoptotic exposure of phosphatidylserine-calreticulin complexes on the cell surface ( xref )."
JMJD6 affects BST2
| 2
| 2
sparser
"Cytoplasmic free calcium mobilization in platelets, expression of P-selectin, phosphatidylserine, and microparticle formation, measured by whole blood flow cytometry, in hypertensive patients."
sparser
"We quantified the binding of fluorescent Annexin V to accessible phosphatidylserine in the outer cell membrane by cytometry, as a measure of early apoptotic events."
ITPR3 affects FGL2
2 |
2 |
biogrid
No evidence text available
biogrid
No evidence text available
IL1RN affects F3
| 2
IL1RN inhibits F3.
| 1
IL1RN inhibits F3. 1 / 1
| 1
sparser
"Analysis of the expression kinetics and regulation by IL-1 of the β-glucan-induced TFs identified by the genome-wide gene expression study uncovered the NFKBIZ gene (encoding IκB-ζ) as the earliest expressed, β-glucan-induced, TF that was inhibited by IL-1RA."
IL1RN binds F3.
| 1
| 1
sparser
"These treatments were also associated with increased IL-1ra, CD142, and VEGF ( xref , xref )."
IL1B affects SDC4
| 2
IL1B increases the amount of SDC4. 2 / 2
| 2
reach
"Wang et al. have demonstrated that IL-1beta treatment increases syndecan-4 (SDC4) expression and its promoter activity by activating NF-kappaB, leading to enhanced ADAMTS-5 synthesis and aggrecan degradation in human NP cells [72]."
reach
"Importantly, analysis of human NP tissues showed a strong correlation between levels of SDC4 and ADAMTS-5 with aggrecan neoepitopes, suggesting that an increase in SDC4 expression by cytokines IL-1beta and TNF-alpha contributes to aggrecan turnover in human disease."
IL1B affects PTGFR
| 2
IL1B increases the amount of PTGFR. 2 / 2
| 2
reach
"Induction of cyclooxygenase-2 and prostaglandin F2alpha receptor expression by interleukin-1beta in cultured human granulosa-luteal cells."
reach
"The IL-1beta treatment implicated by microarray analysis increased gene expression levels of PTGS-2, PTGFR, NFkappa-B p65, IL-17, and IL-8."
IL1B affects ITGB1
2 |
Transcriptionally active IL1B decreases the amount of ITGB1. 2 / 2
2 |
biopax:ctd
No evidence text available
biopax:ctd
No evidence text available
HLA-A affects ERBB3
2 |
2 |
biogrid
No evidence text available
biogrid
No evidence text available
GLG1 affects CD44
| 2
| 2
sparser
"E-selectin binds to glycosylated CD44 and E-selectin ligand 1 (ESL1) [ xref ]."
sparser
"Here, using mice lacking T-synthase in endothelial and hematopoietic cells, we found that E-selectin bound to CD44 and ESL-1 in lysates of T-synthase-deficient neutrophils."
ENO1 affects EDNRA
| 2
| 2
sparser
"Ru(PPh(3))(3)HCl reacts with 1,1'-bis(diphenylphosphino)ferrocene (dppf) to give the 16-electron complex Ru(dppf)(PPh(3))HCl (1d), which upon treatment with NaBAr(4)(F), affords [Ru(dppf){(eta(6)-C(6)H(5))PPh(2)}H]BAr(4)(F) (8), in which the PPh(3) ligand binds eta(6) through one of the PPh(3) phenyl rings."
sparser
"A slightly bulkier m-terphenyl thiolate, SDmp, prevents its nickel complex from forming a Ni-Ni bond, and the mononuclear nickel(I) center of 3 is bound to PPh(3) and SDmp through interactions with the sulfur and a eta(2)-mesityl."
CXCR4 affects BST2
| 2
| 2
sparser
"At multiple time points, we measured binding to surface CXCR4 by flow cytometry using 3 anti-CXCR4 antibodies: 12G5, 1D9, and 2B11."
sparser
"We next examined the binding of HCLX to cell-surface CXCR4 by flow cytometry."
CD44 affects BST2
| 2
| 2
sparser
"Given that circulating CD45 - CD90 + CD44 + cells detected by flow cytometry were associated with early HCC recurrence, circulating cancer stem cell markers may have significant prognostic values in HCC [ xref ]."
sparser
"Treatment of MUC1-positive CD138+ cells from LEN-sensitive Patient 1 with GO-203 was associated with suppression of CD44 expression as determined by flow cytometry ( xref , left; xref )."
CALR affects PTGER3
| 2
CALR inhibits PTGER3. 2 / 2
| 2
sparser
"The phagocytosis of latex particles and the release of superoxide, PGE and TNF-α is almost totally inhibited by RO 31-8220."
sparser
"The release of superoxide and PGE in THP-1 cells is almost totally inhibited by RO 31-8220 and by transfection of THP-1 cells with CMV-asPKC-α ."
CALR affects ABCA1
| 2
CALR binds ABCA1.
| 1
| 1
sparser
"The promising anti-inflammatory effect of SSa on LPS-stimulated primary mouse macrophages is associated with up-regulation of the LXRα-ABCA1 pathway which result in disrupting lipid rafts and reducing translocation of TLR4 to lipid rafts, thereby suppressing TLR4 mediated NF-κB and IRF3 signaling pathways induced by LPS."
CALR activates ABCA1.
| 1
CALR activates ABCA1. 1 / 1
| 1
sparser
"Moreover, SSa activated LXRα, ABCA1 and ABCG1."
WNT11 affects GPC4
| 1
| 1
reach
"These data are consistent with previous results indicating Xenopus glypican-4 interacts with Wnt11 through its N-terminal domain."
VDAC3 affects ATP1A1
1 |
1 |
biogrid
No evidence text available
VDAC2 affects ATP1A1
1 |
1 |
biogrid
No evidence text available
TTYH3 affects TNFRSF1A
1 |
biogrid
No evidence text available
TTYH3 affects S1PR1
1 |
1 |
biogrid
No evidence text available
TTYH3 affects PTGIR
1 |
1 |
biogrid
No evidence text available
TTYH3 affects LPAR1
1 |
1 |
biogrid
No evidence text available
TRAM1 affects HLA-A
1 |
1 |
biogrid
No evidence text available
TNFRSF1A affects IL1B
| 1
| 1
reach
"Previous studies reported that IL1beta and TNFalpha exert toxic effects by binding to their cognate receptors, IL1-R1 and TNFR1, respectively, triggering downstream signaling pathways that activate transcription factors, such as NFkappaB or AP1 which in turn lead to the production of NO and ROS."
TNFRSF11A affects BST2
| 1
sparser
"For the RANK expression analysis, a concordant expression pattern was observed using mAbs in IHC on a variety of positive and negative controls compared with expression analysis tested using other methods, such as flow cytometry using mAbs which bind RANK via distinct epitopes and RT-PCR."
TMEM63B affects LGALS3BP
1 |
biogrid
No evidence text available
TMEM63B affects ATP1A1
1 |
biogrid
No evidence text available
TLR4 affects IL1RN
| 1
| 1
sparser
"Prior research indicates an interaction between IL-1ra and TLR4 in a mouse model of arthritis, as TLR4 stimulation enhances arthritis severity in IL-1ra deficient mice whereas TLR4 deficiency is protective ( xref )."
TLR4 affects CALR
| 1
| 1
reach
"Calreticulin, HMGB1 and HSPs, and ATP then interact with the receptors CD91, Toll like receptor 4 (TLR4), and purinergic P2X7 receptors, respectively, which are present on the surface of DCs."
TIMP1 affects TRPC5
| 1
TIMP1 inhibits TRPC5. 1 / 1
| 1
sparser
"The data suggest that the dietary ω-3 fatty acids lino., DHA and EPA inhibit the TRPC5 homomeric and TRPC1-TRPC5 heteromeric channels."
TIMP1 affects KIT
| 1
TIMP1 inhibits KIT. 1 / 1
| 1
sparser
"In addition, TIMP-1 inhibited c-Kit shedding in CRC cells grown in the presence of exogenous TIMP-1."
TIMP1 affects ITGB1
| 1
| 1
reach
"In human melanoma cell lines, TIMP interacts with ITGB1 and CD63 and assists melanomagenesis and resistance to the cell death program."
TIMP1 affects EFEMP1
| 1
| 1
sparser
"Interaction between fibulin-3 and tissue inhibitor of metalloproteinases-3 (TIMP-3) was reported in vitro and the C-terminal fibulin module was shown to be responsible for this interaction ( xref )."
THBS1 affects S1PR1
| 1
| 1
sparser
"We then performed a ChIP assay to elucidate whether the interaction of mutant p53 with Rad21 affects its binding to the transcription factor-binding site of the S1PR1 and THBS1 genes."
THBS1 affects NOTCH1
| 1
| 1
reach
"TSP1 binds Notch1 by complexing with Jagged1 [XREF_BIBR] and/or Contactin [XREF_BIBR] to inhibit NPC differentiation into oligodendrocytes, thereby promoting their differentiation into nerve cells."
THBS1 affects IL6ST
| 1
| 1
sparser
"Among other seven genes, gene FCGR2A is associated with SLE, gene HSPA1A is involved in antigen-processing, genes THBS1 and IL6ST are associated with cytokine-cytokine receptor induced signaling, and genes GADD45A, THBS1, and CHEK1 are associated with p53 signaling pathway."
THBS1 affects CACNA2D1
| 1
reach
"Immunoprecipitation with anti-FLAG antibodies revealed that the SD2-alpha2delta-1 interaction was diminished in the presence of GBP (XREF_FIG) suggesting that GBP blocks TSP induced synapse formation by interfering with the interaction between alpha2delta-1 and TSP."
SORT1 affects IL1RN
| 1
| 1
reach
"Using chemical cross linking and the yeast two-hybrid system, we show that sortilin interacts with Glut4 and IRAP in the vesicular lumen."
SORT1 affects CALR
| 1
| 1
sparser
"However, mitochondrial associations of SORT1, CALR, and RAB1A and T2DM-associated alterations of their protein levels in the MAM or mitochondria have been never reported in insulin-secreting or responsive tissues/cells."
SLC20A1 affects RNF149
1 |
biogrid
No evidence text available
SLC20A1 affects LRP10
1 |
1 |
biogrid
No evidence text available
SCARB2 affects CTSD
| 1
| 1
sparser
"The dispersed lysosomes associated with cathepsin D and LIMPII were not colocalized with early endosomes, and these vesicles were not inaccessible to the endocytosed anti-transferrin receptor antibody."
PTPRO affects HLA-A
1 |
1 |
biogrid
No evidence text available
PTPRO affects CALR
1 |
1 |
biogrid
No evidence text available
PTPRK affects GLG1
1 |
1 |
biogrid
No evidence text available
PTPRF affects IL1B
| 1
| 1
sparser
"As shown in xref , LAR was positively associated with IL-1β (r=0.41, p<0.001)."
PKD1 affects ATP1A1
1 |
1 |
biogrid
No evidence text available
NTRK1 affects LGALS3BP
1 |
biogrid
No evidence text available
NTRK1 affects HLA-A
1 |
1 |
biogrid
No evidence text available
NTRK1 affects GLG1
1 |
1 |
biogrid
No evidence text available
NTRK1 affects ENO1
1 |
1 |
biogrid
No evidence text available
NTRK1 affects CALR
1 |
1 |
biogrid
No evidence text available
NTRK1 affects ATP1A1
1 |
1 |
biogrid
No evidence text available
NR3C2 affects IL1B
| 1
| 1
sparser
"Molecular sieve chromatography of TAT-IC-activated serum confirmed that 125I-IL-1 beta became bound to high Mr serum proteins."
NR3C2 affects FGL2
| 1
| 1
sparser
"SDS-PAGE and microsequence analyses revealed that the Mr 64,000 fgl2 monomer was assembled into two disulfide-linked oligomers of Mr 260,000 and 280,000."
NLGN3 affects CTSD
1 |
1 |
biogrid
No evidence text available
NID1 affects LGALS3BP
1 |
1 |
hprd
No evidence text available
NALCN affects BST2
| 1
| 1
sparser
"To assess the cellular function of the P2X7 receptor in patients with active disease and healthy controls, we determined the non-selective pore formation induced by ATP by flow cytometry."
M6PR affects ENO1
1 |
1 |
biogrid
No evidence text available
LRP10 affects IFNGR1
1 |
1 |
biogrid
No evidence text available
LRP10 affects CHRM3
1 |
1 |
biogrid
No evidence text available
LRP1 affects IL1RN
| 1
| 1
sparser
"Golgin-160 likely acts together with p115, another Golgi matrix protein that binds IRAP and LRP1, to sequester GSVs within unstimulated cells [ xref , xref , xref ]."
LRP1 affects IL1B
| 1
| 1
sparser
"IL-1RtI knockout mice were resistant to the APR induced by peripherally injected murine IL-1 beta, suggesting that it is not the interaction of endogenous IL-1 beta with IL-1RtII that induces an APR to LPS in these mice."
LIFR affects IL1RN
| 1
| 1
sparser
"Indeed, the latter condition is not associated with changes in serum LIFR or IL-1RA levels, but with a different profile of serum IL-6R production."
LGR4 affects CALR
1 |
1 |
biogrid
No evidence text available
LGR4 affects ATP1A1
1 |
1 |
biogrid
No evidence text available
LGALS3BP affects ITGAV
1 |
biogrid
No evidence text available
LGALS3BP affects ERBB3
1 |
biogrid
No evidence text available
LGALS3BP affects CUL5
1 |
1 |
biogrid
No evidence text available
JMJD6 affects CXCL16
| 1
| 1
sparser
"Eryptotic erythrocyte phosphatidylserine binds to endothelial cell and platelet CXCL16 and CD36, potentially contributing to thrombotic vascular occlusion [24,41] ."
INSR affects IL1B
| 1
| 1
sparser
"DM2 could potently modulate angiogenesis by the interaction of IL-1β with downstream insulin receptor and upstream androgen receptor."
INSR affects ATP1A1
1 |
INSR phosphorylates ATP1A1 on Y10. 1 / 1
1 |
omnipath
No evidence text available
IL6ST affects IL1B
| 1
| 1
reach
"Interleukin (IL) -6 functions downstream of IL-1beta and has unique signal pathways : classic- or trans-signaling via membrane bound IL-6R or soluble IL-6R (sIL-6R)."
IL1RN affects FGFR1
| 1
| 1
sparser
"CLCA4, ANXA9, GPR110, IL1RN, KLK12, PPARD, FLG and HSP90AAl are smoking dependent DEGs whereas GPR110, IL1RN and HSP90AAl are associated with lung cancer FLG is co-expressed with several query genes which are enriched in different cellular growth promoting pathways and FLG together with other genes plays key role in epidermal cell regulation."
IL1R1 affects ENO1
| 1
| 1
reach
"These results suggested that p80, which is generated from ErbB4 and translocates to the nuclei, interacts with alpha-enolase and inhibits neuregulin1 dependent ErbB4 mediated cell proliferation by impairing the c-myc gene transcription."
IL1B affects NALCN
| 1
IL1B activates NALCN. 1 / 1
| 1
sparser
"In addition, using slow voltage ramps we demonstrated that IL-1beta activates a non-selective cationic current (INSC) with a reversal potential of -38.8 +/- 1.8 mV."
IL1B affects GRIA1
| 1
| 1
sparser
"IL-1β affects various classical neurotransmitter systems, and there is evidence that the NMDA glutamate receptor and IL-1β interact with each other."
IL1B affects FGFR1
| 1
| 1
sparser
"In a mouse model of human breast cancer, fibroblast growth factor receptor 1-induced mammary tumorigenesis is associated with local production of IL-1β and can be blocked by treatment with an IL-1β neutralizing antibody (Reed et al., xref )."
IL1B affects CRY1
| 1
| 1
sparser
"Interestingly, although IL1β and IL-18 and their cellular receptors are related proteins, IL-18BP and IL-1βR displayed high specificity towards their targets: IL-18BP was not able to bind IL-1β and vice versa IL-1βR did not bind IL-18 [ xref ]."
IL1B affects CLIC1
| 1
IL1B increases the amount of CLIC1. 1 / 1
| 1
reach
"The intracellular chloride channel proteins CLIC1 and CLIC4 induce IL-1beta transcription and activate the NLRP3 inflammasome."
IL1B affects CASR
| 1
| 1
sparser
"The hypocalcemia of critically ill patients with burn injury or sepsis is associated with CASR gene upregulation by TNF-alpha and IL-1beta via kappaB elements, and by IL-6 via Stat1/3 and Sp1/3 elements in the CASR gene promoters, respectively."
IL1B affects AQP1
| 1
| 1
sparser
"AQP1 deficiency is associated with a marked reduction of both lung IL-1β release and neutrophilic inflammation."
IL1B affects AGTR1
| 1
| 1
sparser
"In this study, we determined whether an interaction between IL-1β and AT1-R in the paraventricular nucleus (PVN) contributes to progression of HF."
IL15RA affects BST2
| 1
| 1
sparser
"More importantly, the increased mRNA expression of IL-15Rα was associated with an increased IL-15Rα cell-surface expression as determined by flow cytometry after 48h of incubation with IFN-α with a more than two-fold increase in mean fluorescence intensity (MFI) (, middle panel)."
IFI30 affects B9D1
1 |
1 |
biogrid
No evidence text available
ENO1 affects EFEMP1
1 |
1 |
biogrid
No evidence text available
ENO1 affects EBP
1 |
1 |
biogrid
No evidence text available
ENO1 affects CUL5
1 |
1 |
biogrid
No evidence text available
ENO1 affects CD4
1 |
1 |
biogrid
No evidence text available
ENO1 affects ATP6AP2
1 |
1 |
biogrid
No evidence text available
CXCL16 affects CD4
| 1
| 1
reach
"Naive CD8 T cells, natural killer T cells and a subset of memory CD4 T cells bind CXCL16, and activated T cells migrated chemotactically to the soluble chemokine."
CUL5 affects CTSD
1 |
1 |
biogrid
No evidence text available
CTSD affects CD4
1 |
1 |
hprd
No evidence text available
CRY2 affects ATP1A1
1 |
1 |
biogrid
No evidence text available
CHRNA7 affects BST2
| 1
| 1
sparser
"We assayed interaction of the amyloid beta peptide with SH-SY5Y cells using flow cytometry for the detection of the fluorescence signal of FITC-labelled A β 1–42 peptide after 5, 10, 15, and 30 min and after 1, 3, 18, and 24 h."
CD44 affects CCL4
| 1
| 1
reach
"Although it has been shown that the proteoglycan moiety of CD44 binds MIP-1beta [118], it is still not known whether the CD44 present on hematopoietic progenitors actually functions as a proteoglycan and binds and/or presents growth factors to the hematopoietic or stromal cells on which it is found."
CD4 affects CCL4
| 1
| 1
sparser
"When antigen-specific CD4 T cells interact with DC, CCL3, and CCL4 are released and this can guide CCR5-positive naïve CD8+T cells into tissues for activation ( xref )."
CCL4 affects PTPN6
| 1
CCL4 activates PTPN6. 1 / 1
| 1
sparser
"MIP-1β activates SHP1 and SHP2, and the tyrosine phosphatase inhibitor orthovanadate can markedly reduce the chemotactic response to MIP-1β ."
BST2 affects KCNH2
| 1
BST2 inhibits KCNH2. 1 / 1
| 1
sparser
"To test for such a scenario, the population of K562 cells with degraded DNA (subG 1 population) was determined in dependence on hERG1 inhibition (0 or 1 µM E4031) by flow cytometry (propidium iodide Nicoletti staining) 24 h after irradiation with 0 or 5 Gy ( xref )."
BST2 affects ITGB3
| 1
BST2 activates ITGB3. 1 / 1
| 1
sparser
"As platelet granule secretion induced by agonist stimulation plays critical roles in the amplification of platelet signaling and subsequent activation and aggregation, we also measured platelet degranulation, represented by P-selectin expression and αIIbβ3 activation by flow cytometry."
BST2 affects ANTXR1
| 1
| 1
sparser
"Using this strategy, a monoclonal antibody, called AF334, was identified that, like SB5, was able to bind both mouse and human TEM8 by flow cytometry."
ATP1A1 affects TRPV4
| 1
ATP1A1 inhibits TRPV4. 1 / 1
| 1
sparser
"Since extracellular NA inhibited TRPV4, we examined the effect of NA on its heat activation."